| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8466 |
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| Symbol | |
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| ID | 8339846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9804433 |
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| End bp | 9805380 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644961553 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003119130 |
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| Protein GI | 256397566 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.238012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0506576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC AGACGTTCAC CAGAGGCCTG ATGGGCCGGA ATCGTTTCCA GGGCAGACGG
CCCAAGAAGG GCGCCGACAC CTACCAGCGA ACCCTGATAT CCCGCACCCA GCTGAACACC
GCGCGGGGCA AGAGGTTCTA CTGGACCGCC CTGACCATCG CGCTGGTGCT GGCCTCCCTG
GTCTTCATCG GCCCGCTGTT CTGGATGGCC ACCGGCGGGT TCAAGACCTC GCAGGAACTG
GTCCGCAACC CCCCGGTCCT GCTGCCGTCA CACCCCTCCA CCCACGCCTT CACCCTGGCG
TGGGACCGGC TGGGGATGGC GCAGCTGCTG TGGAACACGA TCGTCTACGC CGGCGGTGCG
CTGCTGTTCC AGCTCATCTT CTGCGTGTCC GCGGCCTACT CGCTGTCCAA GCTCCGGCCG
ATCTTCGGCA ACTGGATCCT GGCGCTGATG CTGGCCTCGA TGATGATCCC GGCCGCCGCG
CTGGTCATCC CGCAGTACCT GACGGTGCTG GACCTGCCGC TGGTGCACTG GAACCTGCAG
AACACCCCGT GGGTGATCTG GCTGCCGACG GTGGCCAACG CCTTCAACGT GTTCCTGCTC
AAGCGCTTCT TCGACTCCAT CCCGAACGAC CTGCTGGACG CGGCCTCCGT GGACGGCGCC
GGCCCACTGC GCACCCTGTG GCGCATCGTG CTGCCGATGT CCCGGCCGAT CCTCGGGGTG
GTCTCGATCT TCGCGGTGGT CGCGGTCTGG AAGGACTTCC TGTGGCCGCT GATCACCGTG
CCCGCCCACG AGACGCTGAA CGTCGGCGTC AACACCGCCG CCACCTCGAT GCCGGACAAC
GCGCTGGTCG GCGGGCTCTT CCTGGCCTCG ATCCCGACCA TCGTGCTGTT CCTGTTCTTC
CAACGGAACA TCATGGCCGG TCTCACGGTC GGCGGCGTCA AGGGCTGA
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| Protein sequence | MTQQTFTRGL MGRNRFQGRR PKKGADTYQR TLISRTQLNT ARGKRFYWTA LTIALVLASL
VFIGPLFWMA TGGFKTSQEL VRNPPVLLPS HPSTHAFTLA WDRLGMAQLL WNTIVYAGGA
LLFQLIFCVS AAYSLSKLRP IFGNWILALM LASMMIPAAA LVIPQYLTVL DLPLVHWNLQ
NTPWVIWLPT VANAFNVFLL KRFFDSIPND LLDAASVDGA GPLRTLWRIV LPMSRPILGV
VSIFAVVAVW KDFLWPLITV PAHETLNVGV NTAATSMPDN ALVGGLFLAS IPTIVLFLFF
QRNIMAGLTV GGVKG
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