Gene Namu_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0186 
Symbol 
ID8445766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp208550 
End bp209464 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID645039333 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003199608 
Protein GI258650452 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC CCGTTCTCGC CCGGGCCGGC GACACCGTCT CGGCCGGGCA GCGGCAGGCC 
GACCGGCGCG CGGTCCGCGC CCGGGACCGG TTCCATCGCG GACCGGGCCG CTGGATCGTG
CTGGCGATCA TCGTCGCCGG CGCCGCGCTG ATGCTGGTGC CGTTCGCGCT GATGCTGCTC
AACGCGTTCA AGTCGCCGGC CGACTACTCG ACCAACGGCC CGCTGAGCTG GCCGACCGAG
TTCTACACCA AGGGCCTGAC CACCTACTGG ACCGAGTCGG ACTACCCGCT CAAGCTGTGG
AACTCGACCC TGATCGCCGG CACGGTGGCC GTGGCCGCGG TGCTCATCTC GCTGCTCAAC
GCCTACGCGA TCGGCGTCGG GCGGGTCAAG GGCCGGCTGT GGATCGTCGC GTTGTTCCTG
CTGGGCAACA TGATCCCGCA GGAGGCGCTG GTCTACCCGC TGTACTTCCT GGCCAAGGAG
GTCGGCCTCT ACAACACCAA ACTCGTCGTC ATCATCATCT TCACGGTCAT CCAGAGTGCT
TTTGGCACTT ACCTTCTCGC CTCGGTGCTG GGCACCTTCC CGAAGGCCCT GCTGGAGGCG
GCTGCCCTGG ACGGGGCGAG CCGCTGGCAG ATCCTGTGGA AGGTCGTCTT CCCGATCGTG
CGGCCCACCC TGTCGGTGTT GCTGATCTTC TTCTTCATCT GGACCTGGAA CGAGTTCTTC
ATCCCTCTGG TCATGCTCAT CGACAACGCC ACCCAGACGG TGCCCGTCGC GCTGGCCTCG
CTCCAGGGTG ACCGGCTGAT GGACGCACCG ACCACCAACG CCGGAGCCCT GATCAGCCTG
ATCCCGGCGG TCATCTTCTT CCTGATCTTC CAGCGCACGC TGACCCGCGG GGTCACCGCC
GGCGCGATCA AGTAA
 
Protein sequence
MSVPVLARAG DTVSAGQRQA DRRAVRARDR FHRGPGRWIV LAIIVAGAAL MLVPFALMLL 
NAFKSPADYS TNGPLSWPTE FYTKGLTTYW TESDYPLKLW NSTLIAGTVA VAAVLISLLN
AYAIGVGRVK GRLWIVALFL LGNMIPQEAL VYPLYFLAKE VGLYNTKLVV IIIFTVIQSA
FGTYLLASVL GTFPKALLEA AALDGASRWQ ILWKVVFPIV RPTLSVLLIF FFIWTWNEFF
IPLVMLIDNA TQTVPVALAS LQGDRLMDAP TTNAGALISL IPAVIFFLIF QRTLTRGVTA
GAIK