More than 300 homologs were found in PanDaTox collection
for query gene Bfae_01500 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_01500  carbohydrate ABC transporter membrane protein  100 
 
 
315 aa  620  1e-177  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0186  binding-protein-dependent transport systems inner membrane component  68.13 
 
 
304 aa  390  1e-107  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2413  binding-protein-dependent transporter inner membrane component  61.4 
 
 
277 aa  337  1.9999999999999998e-91  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1245  binding-protein-dependent transport systems inner membrane component  54.87 
 
 
287 aa  327  2.0000000000000001e-88  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.544041  n/a   
 
 
-
 
NC_013131  Caci_2785  binding-protein-dependent transport systems inner membrane component  54.26 
 
 
296 aa  318  7.999999999999999e-86  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.391762  normal 
 
 
-
 
NC_011881  Achl_4614  binding-protein-dependent transport systems inner membrane component  54.61 
 
 
296 aa  308  5.9999999999999995e-83  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_6969  binding-protein-dependent transport systems inner membrane component  53.43 
 
 
303 aa  290  3e-77  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0400513  normal 
 
 
-
 
NC_013093  Amir_2985  binding-protein-dependent transport systems inner membrane component  56.04 
 
 
270 aa  279  4e-74  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1308  binding-protein-dependent transport systems inner membrane component  35.91 
 
 
277 aa  158  1e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1220  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
276 aa  155  7e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2001  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
284 aa  155  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.757856  n/a   
 
 
-
 
NC_013739  Cwoe_5439  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
272 aa  152  7e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.691915  normal 
 
 
-
 
NC_013947  Snas_2735  binding-protein-dependent transport systems inner membrane component  35.85 
 
 
268 aa  152  8e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.146401  normal  0.117975 
 
 
-
 
NC_013172  Bfae_00860  ABC-type sugar transport system, permease component  38.3 
 
 
267 aa  149  7e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
294 aa  149  8e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_008541  Arth_0050  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
305 aa  148  1.0000000000000001e-34  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1289  binding-protein-dependent transport systems inner membrane component  33.97 
 
 
271 aa  147  2.0000000000000003e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
294 aa  145  6e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_013739  Cwoe_4452  binding-protein-dependent transport systems inner membrane component  32.55 
 
 
274 aa  144  3e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4398  Monosaccharide-transporting ATPase  32.74 
 
 
281 aa  142  7e-33  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.000709548  normal  0.804646 
 
 
-
 
NC_014151  Cfla_3363  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
274 aa  140  1.9999999999999998e-32  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.364527  hitchhiker  0.005111 
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  28.02 
 
 
275 aa  140  1.9999999999999998e-32  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0036  sugar ABC transporter, permease protein  33.33 
 
 
276 aa  140  3.9999999999999997e-32  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.385725  n/a   
 
 
-
 
NC_007802  Jann_2586  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
294 aa  139  3.9999999999999997e-32  Jannaschia sp. CCS1  Bacteria  hitchhiker  0.000948808  normal 
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
285 aa  140  3.9999999999999997e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_011886  Achl_2899  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
316 aa  139  4.999999999999999e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
283 aa  139  4.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_010717  PXO_00882  L-arabinose transport system permease protein AraQ  29.93 
 
 
278 aa  138  1e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0407955  n/a   
 
 
-
 
NC_008709  Ping_2009  ABC sugar transporter inner membrane binding protein  30.16 
 
 
283 aa  137  3.0000000000000003e-31  Psychromonas ingrahamii 37  Bacteria  normal  0.815195  normal 
 
 
-
 
NC_008726  Mvan_2542  binding-protein-dependent transport systems inner membrane component  30.37 
 
 
275 aa  137  3.0000000000000003e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.607728  normal 
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  31.64 
 
 
277 aa  136  5e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2701  binding-protein-dependent transport systems inner membrane component  29.2 
 
 
275 aa  135  8e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0563997  n/a   
 
 
-
 
NC_014211  Ndas_4908  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
299 aa  135  9.999999999999999e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3639  monosaccharide-transporting ATPase  31.82 
 
 
292 aa  135  9.999999999999999e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3073  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
315 aa  135  9.999999999999999e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009486  Tpet_1681  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
267 aa  135  9.999999999999999e-31  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.0000000705466  n/a   
 
 
-
 
NC_009636  Smed_2422  binding-protein-dependent transport systems inner membrane component  35.24 
 
 
277 aa  134  9.999999999999999e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.161716 
 
 
-
 
NC_012858  Rleg_6792  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
285 aa  134  1.9999999999999998e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3334  binding-protein-dependent transport systems inner membrane component  31.08 
 
 
299 aa  134  1.9999999999999998e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3853  binding-protein-dependent transport systems inner membrane component  30 
 
 
275 aa  133  3e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0623628 
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  29.78 
 
 
273 aa  132  9e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29880  carbohydrate ABC transporter membrane protein  30.69 
 
 
304 aa  131  1.0000000000000001e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3836  binding-protein-dependent transport systems inner membrane component  28.35 
 
 
283 aa  131  1.0000000000000001e-29  Jannaschia sp. CCS1  Bacteria  normal  0.253658  normal 
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  28.16 
 
 
300 aa  131  2.0000000000000002e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7693  putative transmembrane permease component of ABC transporter  34.14 
 
 
286 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.673988 
 
 
-
 
NC_009636  Smed_0188  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
277 aa  130  3e-29  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2716  binding-protein-dependent transporter inner membrane component  32.87 
 
 
293 aa  129  6e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.684184  normal 
 
 
-
 
NC_013131  Caci_5332  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
297 aa  129  8.000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.195165  normal  0.550162 
 
 
-
 
NC_013172  Bfae_29430  ABC-type sugar transport system, permease component  34.12 
 
 
298 aa  129  8.000000000000001e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3073  sugar ABC transporter permease  33.21 
 
 
277 aa  129  9.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_013172  Bfae_05110  carbohydrate ABC transporter membrane protein  29.37 
 
 
295 aa  129  9.000000000000001e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0017  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
300 aa  128  1.0000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.385749  normal 
 
 
-
 
NC_009664  Krad_3467  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
305 aa  128  1.0000000000000001e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0043  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
290 aa  127  2.0000000000000002e-28  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0963  binding-protein-dependent transport systems inner membrane component  35.07 
 
 
302 aa  127  2.0000000000000002e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.341564  decreased coverage  0.00499995 
 
 
-
 
NC_013595  Sros_2192  putative sugar ABC transporter, permease protein  32.13 
 
 
283 aa  127  3e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29400  carbohydrate ABC transporter membrane protein  31.9 
 
 
305 aa  127  3e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  0.709644  n/a   
 
 
-
 
NC_011899  Hore_20500  Monosaccharide-transporting ATPase  26.83 
 
 
291 aa  126  4.0000000000000003e-28  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00337016  n/a   
 
 
-
 
NC_008541  Arth_3141  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
300 aa  126  4.0000000000000003e-28  Arthrobacter sp. FB24  Bacteria  normal  0.522421  n/a   
 
 
-
 
NC_013530  Xcel_0919  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
292 aa  126  5e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.784662  n/a   
 
 
-
 
NC_013739  Cwoe_4881  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
295 aa  126  5e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.48115  normal 
 
 
-
 
NC_010557  BamMC406_6026  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
283 aa  126  6e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.548734  normal  0.778236 
 
 
-
 
NC_008392  Bamb_6326  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
283 aa  126  6e-28  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2029  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
276 aa  125  7e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0827234 
 
 
-
 
NC_013093  Amir_0809  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
281 aa  125  7e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2681  Monosaccharide-transporting ATPase  29.88 
 
 
278 aa  125  7e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.515759  normal 
 
 
-
 
NC_011366  Rleg2_5850  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
276 aa  125  9e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.590535  normal 
 
 
-
 
NC_004311  BRA0306  sugar ABC transporter, permease protein  29.43 
 
 
275 aa  125  1e-27  Brucella suis 1330  Bacteria  normal  0.147324  n/a   
 
 
-
 
NC_012669  Bcav_0827  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
295 aa  124  1e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.122805 
 
 
-
 
NC_012669  Bcav_0320  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
300 aa  124  1e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0194  MalG-type ABC sugar transport system permease component  28.81 
 
 
285 aa  125  1e-27  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6763  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
276 aa  125  1e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.18605  normal 
 
 
-
 
NC_011886  Achl_3602  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
295 aa  125  1e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013525  Tter_0831  binding-protein-dependent transport systems inner membrane component  31.41 
 
 
310 aa  124  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008061  Bcen_4878  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
283 aa  124  2e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1135  binding-protein-dependent transport systems inner membrane component  28.46 
 
 
276 aa  124  2e-27  Clostridium cellulolyticum H10  Bacteria  normal  0.776984  n/a   
 
 
-
 
NC_008543  Bcen2424_3287  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
283 aa  124  2e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1657  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
284 aa  124  2e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.354053  normal  0.174244 
 
 
-
 
NC_010483  TRQ2_0514  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
272 aa  124  3e-27  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1362  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
274 aa  124  3e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  0.159934  normal  0.110996 
 
 
-
 
NC_009832  Spro_2524  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
281 aa  124  3e-27  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3649  binding-protein-dependent transport systems inner membrane component  31 
 
 
281 aa  124  3e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0384109 
 
 
-
 
NC_011988  Avi_5763  ABC transporter membrane spanning protein (sugar)  33.8 
 
 
350 aa  123  3e-27  Agrobacterium vitis S4  Bacteria  normal  0.411796  n/a   
 
 
-
 
NC_013739  Cwoe_3981  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
274 aa  123  4e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.270796  normal 
 
 
-
 
NC_013161  Cyan8802_2285  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
271 aa  123  4e-27  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00314445 
 
 
-
 
NC_013131  Caci_4318  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
295 aa  123  4e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.574995  hitchhiker  0.00173435 
 
 
-
 
NC_011726  PCC8801_2231  Monosaccharide-transporting ATPase  32.02 
 
 
271 aa  123  4e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0887  sugar ABC transporter, permease protein  30.85 
 
 
280 aa  123  5e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.453961  n/a   
 
 
-
 
NC_010159  YpAngola_A4018  carbohydrate ABC transporter permease  30.85 
 
 
279 aa  123  5e-27  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3573  carbohydrate ABC transporter permease  30.85 
 
 
279 aa  123  5e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2662  binding-protein-dependent transport systems inner membrane component  30.49 
 
 
304 aa  123  5e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010465  YPK_3707  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
279 aa  123  5e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2464  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
270 aa  122  6e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  0.668515  normal  0.267306 
 
 
-
 
NC_012028  Hlac_2864  binding-protein-dependent transport systems inner membrane component  28.42 
 
 
278 aa  122  6e-27  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_2010  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
283 aa  122  8e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0403  putative integral membrane transport protein  27.49 
 
 
279 aa  122  9e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2483  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
283 aa  122  9e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0788706  n/a   
 
 
-
 
NC_009921  Franean1_4615  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
295 aa  122  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  normal  0.60944  normal 
 
 
-
 
NC_013131  Caci_2419  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
290 aa  121  9.999999999999999e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3269  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
301 aa  122  9.999999999999999e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
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