Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5763 |
Symbol | |
ID | 7381642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 793152 |
End bp | 794204 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649314 |
Product | ABC transporter membrane spanning protein (sugar) |
Protein accession | YP_002547551 |
Protein GI | 222106760 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.411796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTCA ATCCCATAAC GTTCCTGACC CGCACCCGCC GCCAAGGTCG CATTGGCGTG ACCGATGTGC TGGCCTGGCT CTGGCTGATC CTTGGCACGC TGGCAGTGCT GGTGCCGGTG GTCTGGGCAG GCCTGTCCTC GATGAAACCG GCTGCCGAAA TCACCCGCTT TCCGCCGACG CTTCTGCCGC ACGACGCGGT GGAGGTGACG GTCAAGGGCT ATGACAAGCC GCTCAGCCTT TGGCAGGTCA GCATCGACGG CACGACCCGG CAGATGGCCA TGGTGCGGCG CATCGGCCTG AAGGCGCAGA TGGTCGATCC CGAAAACCCG CAGACCCCGG TCAGCGTCGA TACCCGCACG ATCACGCCGG TCCAGAGCCT GACGATTGCC ACGGAAAACT ACACGGACCC GTTGACCCGG TTTGCCTTCC TGACCTTCCT CAAAAATTCG GTCTTCGTCA CCGTGGTGGC GACGGCTCTC ACGCTGATCG TTAATGCCTT GGCGGCCTTT GCCCTGTCAA AATACCGGTT TCGGGGCGAT AAGGCGGTGT TTGTGCTGAT TATCTCGACC TTGATGATCC CGCTCACCGT TGTCATGGTG CCTGCCTATC TGGTCATTGT CGGGGTCGGG TTGGTGGATA ATCTCTGGGG CGTCATCATC CCGACCATTG CTTCGCCGAC CGGGGTGTTT CTGCTGCGGC AATATATGCT GACCATTCCC GACGAGTTGA TCGAGGCGGC AAGGGTGGAT GCGGCCAGCG AATTCAGGAT CTTCTGGCGG ATCGTCCTGC CGTTGACAGC GCCTGCGCTG GCGGTGTTGG CGATTTTCTC GGTACTCTGG CGCTGGAACG ACTTTCTCTG GCCGCTAATC GTCCTCAGCA GTCGCGAGAA TTTCACCCTA CAGGTCGGGC TCAATGCTTT TCAGGGCGAG TTTTCGGTGC AGTGGAATTA CATCCTCGCC ATGACCTTCC TCAGCCTGAT GCCGGTGACG CTGGTCTTCC TGTTCCTGCA AAAATACATC ACGACAGGCA TTGCCGGGAC GGGGATGAAA TAA
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Protein sequence | MSLNPITFLT RTRRQGRIGV TDVLAWLWLI LGTLAVLVPV VWAGLSSMKP AAEITRFPPT LLPHDAVEVT VKGYDKPLSL WQVSIDGTTR QMAMVRRIGL KAQMVDPENP QTPVSVDTRT ITPVQSLTIA TENYTDPLTR FAFLTFLKNS VFVTVVATAL TLIVNALAAF ALSKYRFRGD KAVFVLIIST LMIPLTVVMV PAYLVIVGVG LVDNLWGVII PTIASPTGVF LLRQYMLTIP DELIEAARVD AASEFRIFWR IVLPLTAPAL AVLAIFSVLW RWNDFLWPLI VLSSRENFTL QVGLNAFQGE FSVQWNYILA MTFLSLMPVT LVFLFLQKYI TTGIAGTGMK
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