Gene Avi_5763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5763 
Symbol 
ID7381642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp793152 
End bp794204 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content60% 
IMG OID643649314 
ProductABC transporter membrane spanning protein (sugar) 
Protein accessionYP_002547551 
Protein GI222106760 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.411796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTCA ATCCCATAAC GTTCCTGACC CGCACCCGCC GCCAAGGTCG CATTGGCGTG 
ACCGATGTGC TGGCCTGGCT CTGGCTGATC CTTGGCACGC TGGCAGTGCT GGTGCCGGTG
GTCTGGGCAG GCCTGTCCTC GATGAAACCG GCTGCCGAAA TCACCCGCTT TCCGCCGACG
CTTCTGCCGC ACGACGCGGT GGAGGTGACG GTCAAGGGCT ATGACAAGCC GCTCAGCCTT
TGGCAGGTCA GCATCGACGG CACGACCCGG CAGATGGCCA TGGTGCGGCG CATCGGCCTG
AAGGCGCAGA TGGTCGATCC CGAAAACCCG CAGACCCCGG TCAGCGTCGA TACCCGCACG
ATCACGCCGG TCCAGAGCCT GACGATTGCC ACGGAAAACT ACACGGACCC GTTGACCCGG
TTTGCCTTCC TGACCTTCCT CAAAAATTCG GTCTTCGTCA CCGTGGTGGC GACGGCTCTC
ACGCTGATCG TTAATGCCTT GGCGGCCTTT GCCCTGTCAA AATACCGGTT TCGGGGCGAT
AAGGCGGTGT TTGTGCTGAT TATCTCGACC TTGATGATCC CGCTCACCGT TGTCATGGTG
CCTGCCTATC TGGTCATTGT CGGGGTCGGG TTGGTGGATA ATCTCTGGGG CGTCATCATC
CCGACCATTG CTTCGCCGAC CGGGGTGTTT CTGCTGCGGC AATATATGCT GACCATTCCC
GACGAGTTGA TCGAGGCGGC AAGGGTGGAT GCGGCCAGCG AATTCAGGAT CTTCTGGCGG
ATCGTCCTGC CGTTGACAGC GCCTGCGCTG GCGGTGTTGG CGATTTTCTC GGTACTCTGG
CGCTGGAACG ACTTTCTCTG GCCGCTAATC GTCCTCAGCA GTCGCGAGAA TTTCACCCTA
CAGGTCGGGC TCAATGCTTT TCAGGGCGAG TTTTCGGTGC AGTGGAATTA CATCCTCGCC
ATGACCTTCC TCAGCCTGAT GCCGGTGACG CTGGTCTTCC TGTTCCTGCA AAAATACATC
ACGACAGGCA TTGCCGGGAC GGGGATGAAA TAA
 
Protein sequence
MSLNPITFLT RTRRQGRIGV TDVLAWLWLI LGTLAVLVPV VWAGLSSMKP AAEITRFPPT 
LLPHDAVEVT VKGYDKPLSL WQVSIDGTTR QMAMVRRIGL KAQMVDPENP QTPVSVDTRT
ITPVQSLTIA TENYTDPLTR FAFLTFLKNS VFVTVVATAL TLIVNALAAF ALSKYRFRGD
KAVFVLIIST LMIPLTVVMV PAYLVIVGVG LVDNLWGVII PTIASPTGVF LLRQYMLTIP
DELIEAARVD AASEFRIFWR IVLPLTAPAL AVLAIFSVLW RWNDFLWPLI VLSSRENFTL
QVGLNAFQGE FSVQWNYILA MTFLSLMPVT LVFLFLQKYI TTGIAGTGMK