| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2419 |
|---|
| Symbol | |
|---|
| ID | 8333768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2737190 |
|---|
| End bp | 2738062 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644955572 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003113178 |
|---|
| Protein GI | 256391614 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAGC CCTCTGCCTC CCGGGGCATG GCGGGATCCA AGCGCGCCGG GCGATGGGCC
CGGCGCGCGG TCGCCGTCGC CATCGGCCTG GCCTTCGTCT TCCCGTTCTA CTGGACGGTG
GTCATCTCGC TCGGGCATCC CGGCGAGTTC AGCGACTTCC CTCCGGTGCT GGTGCCGCAC
TGGGACTGGT CCAACTGGTC GCGCGCCTGG CACGCGGCGC CGTGGGCGCG GCTGTTCGCG
AACACGATCC TGATCGCATC GTGCACGGTG GCGCTGTGTC TGGTCACCTC GCTGCTTGCC
GGGTTCGCCT TCGGGGTGTT GCGCTTCCCG GGCCGCAAGG TGCTGACGCT GGTCGTGCTG
TCCGTGCTGA TGATGCCCGG CACGGTCCTG ATCATTCCGG ACTACGTGCT GGCCAACGAC
CTGCACCTGC TGAACACCTA CTGGATCCAG ATCATCCCGT GGGGCGCCAG CGTGTTCGGG
ATCTTCCTGG TGCGCCAGTT CTTCCTGACC ATGCCCTCGG AGATCCTGGA CGCCGCGGCG
CTGGACGGCG CCTCGCGGCT GCGCTTCCTG CGCTCGATCG GCGTGCCGAT GGTGCGCCCG
GCGCTGGTCA TCGTGGCCAT CAACGTGTTC ATGGGGTCCT GGAACTCCTT CCTGTGGCCG
GTGATCATGA CCAGCTCCAA CATGGAGTCC TCGAGCACGG TGCAGCCGGT CGAGGTCGGG
CTGTCCACCT TCGCCAACGC CGAGGGCACC GACTTCCCGG GCCTGGCCGC CGCGGTCACG
TTCACCACGC TGCCGGTCAT GGTGTTCTTC CTGCTCCTGC AGCGGCAGTT CATCCGGGGC
GCGCTCTCGG CGGCCGGAGG CGTCCGTGGC TGA
|
|---|
| Protein sequence | MSKPSASRGM AGSKRAGRWA RRAVAVAIGL AFVFPFYWTV VISLGHPGEF SDFPPVLVPH
WDWSNWSRAW HAAPWARLFA NTILIASCTV ALCLVTSLLA GFAFGVLRFP GRKVLTLVVL
SVLMMPGTVL IIPDYVLAND LHLLNTYWIQ IIPWGASVFG IFLVRQFFLT MPSEILDAAA
LDGASRLRFL RSIGVPMVRP ALVIVAINVF MGSWNSFLWP VIMTSSNMES SSTVQPVEVG
LSTFANAEGT DFPGLAAAVT FTTLPVMVFF LLLQRQFIRG ALSAAGGVRG
|
|---|
| |