More than 300 homologs were found in PanDaTox collection
for query gene Synpcc7942_1360 on replicon NC_007604
Organism: Synechococcus elongatus PCC 7942



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  100 
 
 
436 aa  871    Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  48.41 
 
 
451 aa  374  1e-102  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  51.32 
 
 
502 aa  365  1e-100  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  51.24 
 
 
492 aa  365  1e-99  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  51.24 
 
 
492 aa  365  1e-99  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  46.92 
 
 
456 aa  352  1e-95  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  43.42 
 
 
475 aa  327  3e-88  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  43.56 
 
 
471 aa  326  5e-88  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  42.31 
 
 
472 aa  320  3.9999999999999996e-86  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  43.36 
 
 
481 aa  313  2.9999999999999996e-84  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  43.36 
 
 
481 aa  313  3.9999999999999997e-84  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_014248  Aazo_1762  cell envelope-like transcriptional attenuator  42.35 
 
 
501 aa  300  3e-80  'Nostoc azollae' 0708  Bacteria  normal  0.103676  n/a   
 
 
-
 
NC_007413  Ava_2679  cell envelope-like transcriptional attenuator  42.66 
 
 
503 aa  290  3e-77  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  38.26 
 
 
471 aa  288  2e-76  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  40.58 
 
 
337 aa  213  5.999999999999999e-54  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  37.02 
 
 
384 aa  205  1e-51  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  35.66 
 
 
377 aa  190  4e-47  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  39.73 
 
 
453 aa  187  3e-46  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  32.41 
 
 
405 aa  186  8e-46  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  33.04 
 
 
445 aa  182  1e-44  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  41.8 
 
 
419 aa  180  4e-44  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  35.81 
 
 
389 aa  180  5.999999999999999e-44  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  39.12 
 
 
403 aa  176  6e-43  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  42.28 
 
 
411 aa  176  9.999999999999999e-43  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  33.08 
 
 
417 aa  160  4e-38  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  31.1 
 
 
308 aa  158  2e-37  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  40.17 
 
 
414 aa  155  1e-36  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  37.39 
 
 
319 aa  150  3e-35  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_008262  CPR_2090  transcription regulator LytR-like protein  29.78 
 
 
437 aa  148  1.0000000000000001e-34  Clostridium perfringens SM101  Bacteria  normal  0.853394  n/a   
 
 
-
 
NC_009012  Cthe_0727  cell envelope-related transcriptional attenuator  33.2 
 
 
308 aa  144  2e-33  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0775994  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  38.08 
 
 
418 aa  142  8e-33  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_008261  CPF_2378  cell envelope-related function transcriptional attenuator  28.88 
 
 
437 aa  142  9.999999999999999e-33  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0983623  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  36.33 
 
 
426 aa  142  1.9999999999999998e-32  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  37.96 
 
 
380 aa  140  6e-32  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  35.38 
 
 
344 aa  137  4e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  38.66 
 
 
490 aa  136  8e-31  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  35.48 
 
 
584 aa  133  6e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  35.83 
 
 
383 aa  133  6.999999999999999e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  29.93 
 
 
313 aa  133  7.999999999999999e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  32.68 
 
 
406 aa  132  1.0000000000000001e-29  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  38.12 
 
 
271 aa  132  2.0000000000000002e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  34.67 
 
 
344 aa  131  2.0000000000000002e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_008820  P9303_09711  membrane bound transcriptional regulator-like protein  31.27 
 
 
298 aa  131  3e-29  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  32.2 
 
 
337 aa  130  4.0000000000000003e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  30.65 
 
 
495 aa  129  1.0000000000000001e-28  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_3102  cell envelope-related transcriptional attenuator  35.09 
 
 
311 aa  129  1.0000000000000001e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0932  transcriptional regulator, putative  28.37 
 
 
329 aa  127  3e-28  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1641  cell envelope-related function transcriptional attenuator  32.16 
 
 
314 aa  128  3e-28  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  35.84 
 
 
374 aa  125  1e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1138  transcription attenuator LytR  33.09 
 
 
405 aa  124  2e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.195072  n/a   
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  32.86 
 
 
322 aa  124  2e-27  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_009487  SaurJH9_1115  hypothetical protein  33.09 
 
 
405 aa  124  2e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.108667  n/a   
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  26.8 
 
 
327 aa  124  3e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  33.73 
 
 
439 aa  124  3e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  26.8 
 
 
327 aa  124  3e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  33.72 
 
 
375 aa  123  7e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  33.72 
 
 
375 aa  123  7e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0640  transcriptional regulator, putative  34.17 
 
 
412 aa  122  8e-27  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.00230389  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  33.33 
 
 
375 aa  122  9.999999999999999e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  37.98 
 
 
372 aa  122  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  33.72 
 
 
377 aa  122  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  37.98 
 
 
374 aa  122  1.9999999999999998e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  33.33 
 
 
375 aa  121  1.9999999999999998e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  33.33 
 
 
375 aa  121  1.9999999999999998e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  33.33 
 
 
377 aa  121  3e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  33.67 
 
 
453 aa  120  4.9999999999999996e-26  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_008531  LEUM_1851  transcriptional regulator  33.05 
 
 
392 aa  120  4.9999999999999996e-26  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  33.92 
 
 
304 aa  119  7e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  33.88 
 
 
318 aa  119  7e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  33.88 
 
 
318 aa  119  7e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  35.91 
 
 
338 aa  119  7.999999999999999e-26  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  35.91 
 
 
338 aa  119  7.999999999999999e-26  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  33.33 
 
 
512 aa  119  9.999999999999999e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  34.68 
 
 
443 aa  119  9.999999999999999e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  32.44 
 
 
310 aa  117  3e-25  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_010320  Teth514_2233  cell envelope-related transcriptional attenuator  31.66 
 
 
303 aa  117  3e-25  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  33.72 
 
 
337 aa  117  3.9999999999999997e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  29.32 
 
 
468 aa  117  3.9999999999999997e-25  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  33.07 
 
 
509 aa  117  3.9999999999999997e-25  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  36.27 
 
 
333 aa  117  3.9999999999999997e-25  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  35.21 
 
 
338 aa  117  3.9999999999999997e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  35.81 
 
 
338 aa  117  5e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  36.27 
 
 
333 aa  116  6e-25  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  36.27 
 
 
333 aa  116  6e-25  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  36.27 
 
 
333 aa  116  6.9999999999999995e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  36.27 
 
 
333 aa  116  6.9999999999999995e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  36.27 
 
 
335 aa  116  6.9999999999999995e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  36.27 
 
 
333 aa  116  6.9999999999999995e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  36.27 
 
 
335 aa  116  6.9999999999999995e-25  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  36.27 
 
 
333 aa  116  6.9999999999999995e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  31.12 
 
 
316 aa  116  7.999999999999999e-25  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  35.35 
 
 
337 aa  115  1.0000000000000001e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  35.35 
 
 
337 aa  115  1.0000000000000001e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  35.35 
 
 
333 aa  115  1.0000000000000001e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  35.35 
 
 
338 aa  115  1.0000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_011772  BCG9842_B4498  transcription antiterminator, LytR family  33.47 
 
 
399 aa  115  1.0000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000182536 
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  35.35 
 
 
337 aa  115  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  35.78 
 
 
333 aa  114  2.0000000000000002e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  36.27 
 
 
317 aa  114  3e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3796  membrane-bound transcriptional regulator LytR  30.95 
 
 
302 aa  114  3e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000323774  n/a   
 
 
-
 
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