Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1360 |
Symbol | |
ID | 3775553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1399742 |
End bp | 1401052 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799791 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_400377 |
Protein GI | 81300169 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGGCTT CACCCATCTC TCGACCAGCG ACTCAAACAA AGGTGAAGCG GATCTCGTCG CCAGCATCAA AACCCCGACG GCTTTGGCCC CAAGTCGGGT TGATGGCTGC GATCGCCAGC GCTGCCGCGA TCGCTACGGC AGGTCTTGTT TATGCCCTCC CCCTCAGCCG TTCTGCCAAG CCGGTTGCGC CCAACTCGCC CTTGATGGCC CTGCTGCCCT ACAGCTTCAA TCGGCCGATC AATGTTCTGG TCATGGGCTT GGATCAGTCG GAAACCGGTG AACAAGCAGA GAAGTTTGAC ACTCGCAGCG ATACCCTGCT GTTATTGCGG TTTGACCCCC TGGAAGGGAC AACCAGCCTC CTCTCGATTC CCCGCGACAC CCAAGTCGCA ATCCCTGGCT ACGGCACCAC CAAAATTAAT GCGGCTAACG TCTTTGGGGG GCCGGCTCTG GCGGCGGATG TGGTTAGTCG CACCCTCAAT GACGTACCGA TCGATCGCTA CCTGCGGATT GACACCACTG CTTTTAAGGA GCTGGTCGAT TTGGTCGGTG GGGTTGAGGT GTATGTGCCC AAGCCGATGC GCTATACCGA CAACACCCAA AAGCTCTACA TCGATCTCCC AGCGGGGCGC CAAACCCTGA ATGGCGATCA GGCAGAACAG TTCGCCCGCT TCCGTTACGA CGAGCTGGGG GATATTGGGC GGGTGCAGCG CCAGCAAATG TTGCTACGGG CCCTACGGGA AAAGCTGGCC AATCCGCTGA TTCTGACGAA GGCACCCGAC TTGGTCAAAG TCCTGCAAAA GTACGTCGAT ACCAACCTCA GCTTTGAAGA ACTGATGGCT CTGGTCAGTA TTGGGCTGCA ACAGGATTTG GCCAATATCC GCATGGTGAT GCTGCCCGGT CGCCCGATTA TGCAGGACGA CGTCAGCTAC TGGCGCTTGG ATGAAGGCGC TCGCGATCGC CTAGTCAGTG ACTTTTTCAA CCAGATCAGT ATCCAGCCAA TCGATCGCTT GGCTTTTGAA GACCTGCGCG TTGCCATTCA AGACTCATCG GGGAAACCCG AAGCAGCCCA AGCCCTTGCT GAATCCTTAG CTAAGTTGGG AATTCGTCGC GTCTACATCA TTGAAGACTG GCCAGAGCCC CTCGAGAAGA CACAAATTAT TGCCCAGCGG GGGGACTTAA TCCAAGCGGA AGGGTTGCAA CAGCAGCTGA ATTTGGGTGA GGTCCGTGCA AGCTCTGATG GCGATATTGG CTCCGACCTG ACAATTCGGA TTGGCCAAGA CTGGCAACCG ACCCCCAGCC CCAAGCCTTA A
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Protein sequence | MGASPISRPA TQTKVKRISS PASKPRRLWP QVGLMAAIAS AAAIATAGLV YALPLSRSAK PVAPNSPLMA LLPYSFNRPI NVLVMGLDQS ETGEQAEKFD TRSDTLLLLR FDPLEGTTSL LSIPRDTQVA IPGYGTTKIN AANVFGGPAL AADVVSRTLN DVPIDRYLRI DTTAFKELVD LVGGVEVYVP KPMRYTDNTQ KLYIDLPAGR QTLNGDQAEQ FARFRYDELG DIGRVQRQQM LLRALREKLA NPLILTKAPD LVKVLQKYVD TNLSFEELMA LVSIGLQQDL ANIRMVMLPG RPIMQDDVSY WRLDEGARDR LVSDFFNQIS IQPIDRLAFE DLRVAIQDSS GKPEAAQALA ESLAKLGIRR VYIIEDWPEP LEKTQIIAQR GDLIQAEGLQ QQLNLGEVRA SSDGDIGSDL TIRIGQDWQP TPSPKP
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