More than 300 homologs were found in PanDaTox collection
for query gene PputGB1_1095 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1490  methyltransferase, CheR-like  91.98 
 
 
424 aa  743    Pseudomonas putida KT2440  Bacteria  decreased coverage  0.00772145  normal  0.942739 
 
 
-
 
NC_009512  Pput_4232  protein-glutamate O-methyltransferase  91.54 
 
 
424 aa  702    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1095  TPR repeat-containing CheR-type MCP methyltransferase  100 
 
 
424 aa  845    Pseudomonas putida GB-1  Bacteria  normal  0.0323093  normal  0.979703 
 
 
-
 
NC_010501  PputW619_4128  MCP methyltransferase, CheR-type  74.53 
 
 
414 aa  582  1.0000000000000001e-165  Pseudomonas putida W619  Bacteria  normal  0.116818  normal 
 
 
-
 
NC_007492  Pfl01_1054  MCP methyltransferase, CheR-type  61.92 
 
 
425 aa  497  1e-139  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.230252 
 
 
-
 
NC_007005  Psyr_1305  protein-glutamate O-methyltransferase  57.51 
 
 
426 aa  429  1e-119  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  decreased coverage  0.00140607 
 
 
-
 
NC_004578  PSPTO_1495  chemotaxis protein methyltransferase CheR, putative  56.41 
 
 
426 aa  425  1e-118  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1431  putative methyltransferase  54.05 
 
 
421 aa  400  9.999999999999999e-111  Pseudomonas aeruginosa PA7  Bacteria  normal  0.598863  n/a   
 
 
-
 
NC_008463  PA14_16450  putative methyltransferase  53.92 
 
 
422 aa  394  1e-108  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.18822  normal 
 
 
-
 
NC_010681  Bphyt_3977  MCP methyltransferase, CheR-type with Tpr repeats  42.08 
 
 
476 aa  309  5.9999999999999995e-83  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3651  MCP methyltransferase, CheR-type  45.97 
 
 
416 aa  290  2e-77  Ralstonia eutropha JMP134  Bacteria  normal  0.114593  n/a   
 
 
-
 
NC_010623  Bphy_5393  TPR repeat-containing CheR-type MCP methyltransferase  42.01 
 
 
472 aa  290  4e-77  Burkholderia phymatum STM815  Bacteria  normal  normal  0.378929 
 
 
-
 
NC_007974  Rmet_3971  putative chemotaxis MCP methyltransferase CheR-type  46.46 
 
 
429 aa  290  4e-77  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000407397  hitchhiker  0.00492524 
 
 
-
 
NC_007511  Bcep18194_B2306  MCP methyltransferase, CheR-type  40.94 
 
 
470 aa  288  2e-76  Burkholderia sp. 383  Bacteria  normal  normal  0.393691 
 
 
-
 
NC_010086  Bmul_4944  MCP methyltransferase  39.54 
 
 
479 aa  275  1.0000000000000001e-72  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.102677  normal 
 
 
-
 
NC_003296  RS02206  putative methyltransferase protein  41.22 
 
 
466 aa  272  8.000000000000001e-72  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3735  TPR repeat-containing CheR-type MCP methyltransferase  40.85 
 
 
470 aa  270  2.9999999999999997e-71  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.841213  normal 
 
 
-
 
NC_008061  Bcen_4575  MCP methyltransferase, CheR-type  40.85 
 
 
472 aa  269  7e-71  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.122691  n/a   
 
 
-
 
NC_008543  Bcen2424_3788  MCP methyltransferase, CheR-type  40.85 
 
 
472 aa  269  7e-71  Burkholderia cenocepacia HI2424  Bacteria  normal  0.157072  normal  0.393051 
 
 
-
 
NC_011726  PCC8801_1437  MCP methyltransferase, CheR-type with Tpr repeats  34.7 
 
 
406 aa  241  2e-62  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_2070  MCP methyltransferase, CheR-type with Tpr repeats  33.9 
 
 
431 aa  238  1e-61  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0814478 
 
 
-
 
NC_013161  Cyan8802_1463  MCP methyltransferase, CheR-type with Tpr repeats  33.98 
 
 
406 aa  237  2e-61  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0503  CheR methyltransferase SAM binding/TPR domain-containing protein  48.45 
 
 
688 aa  235  1.0000000000000001e-60  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3681  TPR repeat-containing CheR-type MCP methyltransferase  46.43 
 
 
510 aa  234  2.0000000000000002e-60  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0294696  normal 
 
 
-
 
NC_008391  Bamb_5515  MCP methyltransferase, CheR-type  46.4 
 
 
520 aa  231  2e-59  Burkholderia ambifaria AMMD  Bacteria  normal  0.201432  normal  0.747689 
 
 
-
 
NC_009078  BURPS1106A_A2540  CheR methyltransferase family protein  47.14 
 
 
684 aa  223  4.9999999999999996e-57  Burkholderia pseudomallei 1106a  Bacteria  normal  0.389776  n/a   
 
 
-
 
NC_006349  BMAA0219  CheR methyltransferase SAM binding/TPR domain-containing protein  47.14 
 
 
684 aa  223  4.9999999999999996e-57  Burkholderia mallei ATCC 23344  Bacteria  normal  0.35952  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0966  CheR methyltransferase SAM binding/TPR domain-containing protein  47.14 
 
 
684 aa  223  4.9999999999999996e-57  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1597  CheR methyltransferase SAM binding/TPR domain-containing protein  47.14 
 
 
684 aa  223  4.9999999999999996e-57  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2685  CheR methyltransferase family protein  47.14 
 
 
684 aa  223  4.9999999999999996e-57  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0256  CheR methyltransferase SAM binding/TPR domain-containing protein  47.14 
 
 
684 aa  223  4.9999999999999996e-57  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1400  CheR methyltransferase SAM binding/TPR domain-containing protein  47.14 
 
 
684 aa  223  4.9999999999999996e-57  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0829  CheR family methyltransferase  36.03 
 
 
417 aa  201  1.9999999999999998e-50  Methylococcus capsulatus str. Bath  Bacteria  normal  0.973047  n/a   
 
 
-
 
NC_009483  Gura_4168  response regulator receiver protein  30.59 
 
 
622 aa  151  3e-35  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3195  TPR repeat-containing CheR-type MCP methyltransferase  32.72 
 
 
463 aa  144  2e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.13083 
 
 
-
 
NC_009523  RoseRS_0993  protein-glutamate O-methyltransferase  31.58 
 
 
468 aa  141  1.9999999999999998e-32  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.522171 
 
 
-
 
NC_010725  Mpop_2954  MCP methyltransferase, CheR-type with Tpr repeats  32.43 
 
 
489 aa  132  1.0000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03244  chemotaxis protein methyltransferase CheR  30.89 
 
 
284 aa  131  2.0000000000000002e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2215  chemotaxis protein methyltransferase CheR  33.87 
 
 
289 aa  130  5.0000000000000004e-29  Geobacter sulfurreducens PCA  Bacteria  normal  0.171483  n/a   
 
 
-
 
NC_011365  Gdia_3075  MCP methyltransferase, CheR-type  31.27 
 
 
475 aa  130  6e-29  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.54871  hitchhiker  0.00801786 
 
 
-
 
NC_007517  Gmet_2305  MCP methyltransferase, CheR-type  31.84 
 
 
291 aa  125  1e-27  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3218  MCP methyltransferase, CheR-type  37.62 
 
 
295 aa  123  5e-27  Geobacter sp. M21  Bacteria  n/a    normal  0.108561 
 
 
-
 
NC_007643  Rru_A2325  MCP methyltransferase, CheR-type  30.27 
 
 
276 aa  123  6e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1043  MCP methyltransferase, CheR-type  38.31 
 
 
283 aa  121  1.9999999999999998e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0360  MCP methyltransferase, CheR-type  32.11 
 
 
436 aa  121  1.9999999999999998e-26  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0762  MCP methyltransferase, CheR-type  33.04 
 
 
288 aa  119  7e-26  Geobacter sp. M21  Bacteria  n/a    normal  0.454256 
 
 
-
 
NC_009675  Anae109_0659  protein-glutamate O-methyltransferase  33.58 
 
 
499 aa  119  7.999999999999999e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.289083  normal 
 
 
-
 
NC_009012  Cthe_2820  MCP methyltransferase, CheR-type  33.33 
 
 
277 aa  119  9e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.353038  n/a   
 
 
-
 
NC_011894  Mnod_5450  MCP methyltransferase, CheR-type  30.83 
 
 
474 aa  119  9.999999999999999e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.328057  n/a   
 
 
-
 
NC_011146  Gbem_0747  MCP methyltransferase, CheR-type  32.59 
 
 
288 aa  118  1.9999999999999998e-25  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1011  chemotaxis protein methyltransferase CheR  32.24 
 
 
281 aa  117  5e-25  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3139  protein-glutamate O-methyltransferase  31.71 
 
 
291 aa  115  1.0000000000000001e-24  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1405  MCP methyltransferase, CheR-type  36.02 
 
 
284 aa  116  1.0000000000000001e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.216379  n/a   
 
 
-
 
NC_009012  Cthe_2282  MCP methyltransferase, CheR-type  31.92 
 
 
270 aa  115  1.0000000000000001e-24  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.977677  n/a   
 
 
-
 
NC_010814  Glov_2118  MCP methyltransferase, CheR-type  30.31 
 
 
283 aa  115  1.0000000000000001e-24  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0647  chemotaxis protein methyltransferase  29.39 
 
 
271 aa  115  2.0000000000000002e-24  Treponema denticola ATCC 35405  Bacteria  normal  0.63831  n/a   
 
 
-
 
NC_009675  Anae109_0466  protein-glutamate O-methyltransferase  32.08 
 
 
492 aa  115  2.0000000000000002e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.451123  normal  0.766858 
 
 
-
 
NC_010338  Caul_0281  MCP methyltransferase, CheR-type  33.6 
 
 
292 aa  114  3e-24  Caulobacter sp. K31  Bacteria  normal  0.354754  normal 
 
 
-
 
NC_010571  Oter_2937  MCP methyltransferase, CheR-type  33.33 
 
 
285 aa  114  4.0000000000000004e-24  Opitutus terrae PB90-1  Bacteria  normal  0.324206  normal  0.583593 
 
 
-
 
NC_009483  Gura_2689  protein-glutamate O-methyltransferase  34.25 
 
 
283 aa  113  5e-24  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000470829  n/a   
 
 
-
 
NC_011146  Gbem_2030  MCP methyltransferase, CheR-type with Tpr repeats  27.47 
 
 
481 aa  114  5e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1198  protein-glutamate O-methyltransferase  30.19 
 
 
327 aa  113  8.000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.112441  n/a   
 
 
-
 
NC_002939  GSU1143  chemotaxis protein methyltransferase CheR  33.2 
 
 
292 aa  112  1.0000000000000001e-23  Geobacter sulfurreducens PCA  Bacteria  normal  0.0207024  n/a   
 
 
-
 
NC_007948  Bpro_2459  MCP methyltransferase, CheR-type  27.6 
 
 
502 aa  112  1.0000000000000001e-23  Polaromonas sp. JS666  Bacteria  normal  0.143998  normal  0.100833 
 
 
-
 
NC_008463  PA14_02200  putative chemotaxis protein methyltransferase  35.16 
 
 
280 aa  112  1.0000000000000001e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.077708  normal 
 
 
-
 
NC_011146  Gbem_2379  MCP methyltransferase, CheR-type with Tpr repeats  28.76 
 
 
614 aa  112  1.0000000000000001e-23  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4031  MCP methyltransferase, CheR-type  35.92 
 
 
287 aa  112  1.0000000000000001e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.236096  normal  0.66198 
 
 
-
 
NC_009483  Gura_2691  protein-glutamate O-methyltransferase  31.66 
 
 
298 aa  112  1.0000000000000001e-23  Geobacter uraniireducens Rf4  Bacteria  normal  0.286445  n/a   
 
 
-
 
NC_010718  Nther_1604  MCP methyltransferase, CheR-type  28.16 
 
 
260 aa  112  2.0000000000000002e-23  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0143514  unclonable  1.76137e-23 
 
 
-
 
NC_011757  Mchl_3062  MCP methyltransferase, CheR-type  30.88 
 
 
485 aa  110  3e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1940  MCP methyltransferase, CheR-type  32.12 
 
 
259 aa  110  4.0000000000000004e-23  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1710  MCP methyltransferase, CheR-type  35.29 
 
 
285 aa  110  4.0000000000000004e-23  Methylobacterium populi BJ001  Bacteria  normal  0.151818  normal 
 
 
-
 
NC_012918  GM21_2189  MCP methyltransferase, CheR-type with Tpr repeats  27.71 
 
 
481 aa  110  4.0000000000000004e-23  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009664  Krad_1849  Protein-glutamate O-methyltransferase  32.92 
 
 
291 aa  110  5e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.313486  normal 
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  31.95 
 
 
1378 aa  108  1e-22  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_011145  AnaeK_0649  MCP methyltransferase, CheR-type with Tpr repeats  29.91 
 
 
500 aa  108  1e-22  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1813  MCP methyltransferase, CheR-type  34.03 
 
 
285 aa  108  1e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.178161  normal  0.138477 
 
 
-
 
NC_009485  BBta_6555  MCP methyltransferase, CheR-type  32.53 
 
 
289 aa  108  1e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.842137  normal  0.205146 
 
 
-
 
NC_011891  A2cp1_0640  MCP methyltransferase, CheR-type  30.18 
 
 
500 aa  109  1e-22  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0661  MCP methyltransferase, CheR-type  30.33 
 
 
271 aa  109  1e-22  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.463907 
 
 
-
 
NC_013422  Hneap_1430  MCP methyltransferase, CheR-type  31.71 
 
 
267 aa  108  2e-22  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1601  CheB methylesterase, CheR methyltransferase, hybrid histidine kinase  34.69 
 
 
1222 aa  108  2e-22  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.472526  n/a   
 
 
-
 
NC_011769  DvMF_0466  MCP methyltransferase, CheR-type  34 
 
 
295 aa  108  2e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.176521 
 
 
-
 
NC_010172  Mext_1533  protein-glutamate O-methyltransferase  34.03 
 
 
285 aa  108  2e-22  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0781767 
 
 
-
 
NC_009621  Smed_5115  protein-glutamate O-methyltransferase  28.22 
 
 
452 aa  108  2e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.466931  normal  0.0136698 
 
 
-
 
NC_009801  EcE24377A_2117  chemotaxis methyltransferase CheR  33.47 
 
 
286 aa  106  6e-22  Escherichia coli E24377A  Bacteria  normal  0.396301  n/a   
 
 
-
 
NC_010814  Glov_1731  MCP methyltransferase, CheR-type  31.47 
 
 
290 aa  106  8e-22  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0615  MCP methyltransferase, CheR-type  33.01 
 
 
500 aa  106  9e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.276071  n/a   
 
 
-
 
NC_011899  Hore_22590  Protein-glutamate O-methyltransferase  28.63 
 
 
309 aa  106  9e-22  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0871  MCP methyltransferase, CheR-type  30.35 
 
 
414 aa  106  9e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0159  chemotaxis protein methyltransferase CheR  33.74 
 
 
273 aa  105  1e-21  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4609  MCP methyltransferase, CheR-type  29.63 
 
 
290 aa  106  1e-21  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2455  chemotaxis methyltransferase CheR  35.04 
 
 
288 aa  105  1e-21  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0163  MCP methyltransferase, CheR-type  29.77 
 
 
280 aa  105  1e-21  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1839  MCP methyltransferase, CheR-type with Tpr repeats  31.57 
 
 
611 aa  105  1e-21  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00242701 
 
 
-
 
NC_013132  Cpin_7206  signal transduction histidine kinase with CheB and CheR activity  29.37 
 
 
1499 aa  105  1e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_2622  chemotaxis methyltransferase CheR  33.61 
 
 
286 aa  105  1e-21  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000206628 
 
 
-
 
NC_009972  Haur_0728  TPR repeat-containing CheR-type MCP methyltransferase  28.34 
 
 
486 aa  105  1e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2652  MCP methyltransferase, CheR-type with Tpr repeats  30.43 
 
 
383 aa  105  2e-21  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1980  chemotaxis methyltransferase CheR  33.61 
 
 
286 aa  105  2e-21  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
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