| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3195 |
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| Symbol | |
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| ID | 5540693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4154693 |
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| End bp | 4156084 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895316 |
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| Product | TPR repeat-containing CheR-type MCP methyltransferase |
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| Protein accession | YP_001433267 |
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| Protein GI | 156743138 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.13083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACGA CCTTCAGCGA TGATCTCTTC CGCCGATTTC GCGATCTGCT GCTGACACGC
AGTGGTCTCT ACTTTCCCGA CCATCGGCGG AGCGATCTCC ATCATTGCCT GACAATGGTG
TTGCCGGCTA CCGGATATGC AACGCTTGAA GCGCTCTATG CGGCTGCGGT TGTCGATGAC
AAGACGCTGC ACACCGTGAT TGAAGGCGTC ACCGTCGGTG AAACCTACTT CTTTCGCAAC
ACTTCACAGT TTACCGCACT GCGCGACCGG ATCCTCCCCG ACCTGATCGC CCGACGCGAG
GTGATCCGGT CGCTACGTTT CTGGAGCGCC GGTTGCGCTA CGGGCGAAGA GCCATATTCG
CTGGCGATTC TCCTGCACGA AGCGCTGCCC GATCCCGATG CCTGGCAGAT CACGATTCTG
GCGACCGACA TTAATACCGC ATTTCTGAAC CGCGCGCGCG CCGGGGTGTA TGGCGCCTGG
TCGTTCCGTG AAACCGATCC GGCGCTGCGG GATCGCTATT TTGAGCGCCT TGAAGGAACA
CGCTGGCGGA TACGTTCCGA TCTCCGCCGT CAGGTGCTGT TTGCGCGGTT GAATCTGGTC
GAAGACGAGT ATCCGGCGGT GATGAACGGC ACCACGATGC AGGATGTCAT TCTCTGTCGC
AATGTGCTGA TCTATTTCGA CGACGACACA ATCCGCGCGG TGGTGCGCCG TTTGTATCGC
GCCCTGACCC CTGGCGGCTG GTTGATCGTC GGGCATGCCG AAGCGCGCTC CGATTTCTTC
GCCCAATTCG AGGTTGTCAA TTGTCCGGGA ACCGTTATCT ATCGCAAGCC GTTGCATGCG
CCGCTCTTTG ATGAGGCGAT TCCGTCTGTG CCTGCACGCC AGATGGTCCG TCCGCTATCG
ACTACATCTG CCGACGTGGC GTCGCTCCTG CTGCCTGCGC CGGCTGCGCC ATCGCCGTCC
TTCGTGTCTG ACACGCCGGT TGCCGACAAT GCTGCGCCCG ATACGCTGGC GGTGGCGCGG
CAGGCGGCGG ATCGCGGCGA TCTGGCCACT GCGATGCGGC TATGTGAGAC AATGGTCCAA
CACCAGCCGC TCTCTGCCGA GGCGCACCTG CTCAACGGGC AAATCCTGGA GCAACAGGGA
CGCCTGGATG AAGCGCTTGC CGCCTATCGG CGCGCCGTCT ATCTCGATCA TTCCCTCTAT
CTGGCTTTGC TGGCAATGGC CGGTATTCTT CATCGCACCG GTCACGTCGA TGAAGCCTAT
CGAGCGTACC GCAGGCTGCT TCGCGCGCTC GCAACACTGC CGCCGCATGC GCCGGTTCCT
TCGTTCGACA ACGCGACTGC CGCAGAACTC CAGATGTTCA TTCAGCGCCA GATGGAGGCG
CTTCGGCGCT GA
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| Protein sequence | MNTTFSDDLF RRFRDLLLTR SGLYFPDHRR SDLHHCLTMV LPATGYATLE ALYAAAVVDD
KTLHTVIEGV TVGETYFFRN TSQFTALRDR ILPDLIARRE VIRSLRFWSA GCATGEEPYS
LAILLHEALP DPDAWQITIL ATDINTAFLN RARAGVYGAW SFRETDPALR DRYFERLEGT
RWRIRSDLRR QVLFARLNLV EDEYPAVMNG TTMQDVILCR NVLIYFDDDT IRAVVRRLYR
ALTPGGWLIV GHAEARSDFF AQFEVVNCPG TVIYRKPLHA PLFDEAIPSV PARQMVRPLS
TTSADVASLL LPAPAAPSPS FVSDTPVADN AAPDTLAVAR QAADRGDLAT AMRLCETMVQ
HQPLSAEAHL LNGQILEQQG RLDEALAAYR RAVYLDHSLY LALLAMAGIL HRTGHVDEAY
RAYRRLLRAL ATLPPHAPVP SFDNATAAEL QMFIQRQMEA LRR
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