Gene Bphy_5393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5393 
Symbol 
ID6246878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2537263 
End bp2538681 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content69% 
IMG OID642597114 
ProductTPR repeat-containing CheR-type MCP methyltransferase 
Protein accessionYP_001861517 
Protein GI186474175 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.378929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCG CGAACGCCTT CATGCCGCGC TTCGAAGCCT GGCTCCTGCG GGAGACGGGG 
ATCGACGCGT CGTCGCTCGG CGTGGCCGCG CTCGAACGCG CGGTGCTCGA ACGCGTGCGC
GTCGCGTGGA TCGGTGCCGA TGCGCACGAC ACGAGCGTGT GCGTCGATCC CGCCGACATC
GACGCGTACT GGCAGCAACT GACGACGTCG CGCGACGAGC GGCAGGCGCT GATCGAAGCG
CTCGTCGTGC CCGAGACGTG GTTCTATCGC GACCGCGAAG CGTATGTCGC GCTCGCGCGG
CTCGCGAACG AGCGGCTCGT GCGCGAGCCG GCGCGTCTGC TGCGCGTGCT GAGCCTGCCT
TGCTCGACGG GCGAGGAGCC GTACTCGGCT GCGATGGCCC TGCTCGACGA CGGCATCGGC
GAGAACCGCT TTACCGTGGA GGCATTCGAT ATCAGCGCGC GCGTCATCGA TCATGCGCGC
GCCGGCATCT ACGGACGCAA TTCGTTTCGC GGCCTTCCGC TCGCGTTTCG CGACCGGCAT
TTCACTGCGC TCGAGAACGG CTGGCAACTG GACGAGCGCG TGCGGCAGAC GGTTCGCTTC
GCGCAGGCCA ACCTGTTCGA CTTACAGGCG AACGCGCAAG CGCCCTACGA CTTCATCTTC
TGCCGCAACG TGCTGATCTA TTTCGATCGC GAAGCGCAGG ACCGTGCAAT CCGTCTGCTC
GACGCGAGTC TCGCCGATGG CGGCACGATC TTCGTCGGTC CCGCGGAAAC GGGCCTGATG
TTGCGTCACG CGATGACGTC GGCGCGCATT CCACTCGCCT TTGCGTTTCG GCGCAGCACA
CGGGAGGAAC GGGACACCAC GCGGCGGGCG GTGCAGCAGG CTGTGCCCGT AGCGGCGCGC
GACATGCATG CGCCCAGATC CGCTGCAGCC GAACGCGAAT CGGCAAAGCC ATCGCTCGCG
CAGCGCGCGT TCACGCGCGC ACCGTTGCGC GCGCCCCGGC CTGTCCAGGC GATGCCGCCC
GACGCGTCGC CGCAGCCGGC CGCCGAGCGC TCGCTCGATG CGGCGCGCCG CCACGCCGAT
GCCGGCGACT TCGACGCCGC GGAACGCCTC GCGCATCAGC ATGCGCTCGT GCACGGCCCG
AACGTCGACG CGTTCTATCT GCTGGGACTG ATCGCGGATG CGCGCGGGCG CGGCGACGCT
GCCGCAGACT TCTATCGCAA GGCGCTGTAC CTGGACCCCG CGCATTACGA GGCGCTCACG
CATCTGGCCG TGCTGCTCGA TATCGGCGGC GACCGCGCGG GCGCGCAGAA CCTGGTGCAG
CGCGCGCAAC GCTCGGCCGC GCGCGCCGCG CAGTCGACGG ACGCGTCGGC AGACGAAGCA
CAACGCTCAC GAGGATTCCA TGCTTCACGA CGCGCCTGA
 
Protein sequence
MNAANAFMPR FEAWLLRETG IDASSLGVAA LERAVLERVR VAWIGADAHD TSVCVDPADI 
DAYWQQLTTS RDERQALIEA LVVPETWFYR DREAYVALAR LANERLVREP ARLLRVLSLP
CSTGEEPYSA AMALLDDGIG ENRFTVEAFD ISARVIDHAR AGIYGRNSFR GLPLAFRDRH
FTALENGWQL DERVRQTVRF AQANLFDLQA NAQAPYDFIF CRNVLIYFDR EAQDRAIRLL
DASLADGGTI FVGPAETGLM LRHAMTSARI PLAFAFRRST REERDTTRRA VQQAVPVAAR
DMHAPRSAAA ERESAKPSLA QRAFTRAPLR APRPVQAMPP DASPQPAAER SLDAARRHAD
AGDFDAAERL AHQHALVHGP NVDAFYLLGL IADARGRGDA AADFYRKALY LDPAHYEALT
HLAVLLDIGG DRAGAQNLVQ RAQRSAARAA QSTDASADEA QRSRGFHASR RA