| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2954 |
|---|
| Symbol | |
|---|
| ID | 6310621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3182599 |
|---|
| End bp | 3184068 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642651680 |
|---|
| Product | MCP methyltransferase, CheR-type with Tpr repeats |
|---|
| Protein accession | YP_001925644 |
|---|
| Protein GI | 188582199 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGATT CCGCCGAGCG GGCCCGTCGC GCTGCGGGCG CGATGGCCGA TCCCGGTTTT
CCCGCTCTCA AGGAGCGGGT GATCGCCCGC ACCGGGCACA ATTACTACGA GGACAAGGAC
GACCTGCTCT ACGACCGCCT GCGCAAGCGG ATGCGGATGT GCGGGGTCGG CGACTGCACC
GCCTATCGCG TCCTGCTCGA AGGCGCCGCC GGACGGGACG AATGGGCGGC GCTCGAGGCC
GAGATCACCA TCGGCGAGAC CTTCTTCTTT CGCTACGCCG AGCAGTTCGC CGCCTTGCGC
AAGTCCATCC TGCCGGAGCT GATCGCGGCC CGCAGCGAGA TCCGCCGCCT GCGGATCTGG
AGCGCGGGCT GCTCGACCGG GGCGGAGCCC TATTCGCTGG CCATCCTCGT TCACGACCTG
CTCGGCGAGG CACTTGCCGA ATGGTCGGTG ACGATCCTCG GCACCGATCT CAGCGCGGCG
GCGCTCGCCA CCGCCCGCGC GGCGGAGTTC GGCCCCTGGG CCCTGCGCAC CCTGGACACC
GAAGAGCGCG CCCGCTGGTT TCGCCGTACC CCGGCGCGGC CGGGCCTGCC GCATGGCGGC
TACGCCCTGC GCCCGGCCTT CCGGCGGATG GTGCGCTTCG AGCGGCAGAA CCTGTTGGGC
CTGATCGACG GAAGCGACCG GATCCAGGGC AGCTTCGACC TGATCCTGTG CCGCAACGTG
CTGATCTATT TCAGTCCGGA TCACGTGAAT CGCATCGTCC GGGCCCTGGG CGAGCGGCTC
GACGCGCGGG GCTGGCTCCT GATCGGCCAT GCCGAGCCGA ACCCCACCTT TTCGCAATGG
CTCCAGCCCG TGGCCCTGCC GGGAACGGTC GCCTATCGCC CGATCGACAC GCCGACGACC
GAGCCGCCAC CGGTCCTCGT GCCGGCGCGT CCGGACGCGG TGCCGATCCC GCTTGCCCCG
CTGCCCGCGT TCGTAGCGGT AGAACCGGCA GCGCCCATGC CGGAGCCGAT CGGAATCCCC
ATCCCGCTCC CGGCGGAGCC CGCCACGGAG CATCCCCTGT CGCCGGGCGA TCTCCTGGCC
GAGATCCGCG TCCTGGCGGA TTCGGGCGAA ACCGCGCGGG CGTGGCGCCG GCTGCATGAG
GAGATCGAGA GCTACGCCAC CGATCCGGCC CTGCGCTACT ACGAGGGCCT GCTCGCGCTC
GACCTCGGAA GGGAACGGGA GGCCGAACGC GCCCTGCGCG GAGCGTTGTT CCTCGACCGC
GGCTTCGTCA TGGCCCATTT CCAGCTCGGC TTGCTGCTCG CCCGTGCCGG ACGCCGGGGT
GAGGCTGCCC GCGCCCTCGA CAATGCCCTG CGCCTCGCGC AAGGACTGTC GCCCGAAACG
ATCCTGCCGG AGGGAGACGG AGTGAGCGCC GCACGCTTGG CCGAGAGCGC TCGCCGCGCC
CTGGCCGGAA TCACGGTGAG CGAGGCATGA
|
|---|
| Protein sequence | MTDSAERARR AAGAMADPGF PALKERVIAR TGHNYYEDKD DLLYDRLRKR MRMCGVGDCT
AYRVLLEGAA GRDEWAALEA EITIGETFFF RYAEQFAALR KSILPELIAA RSEIRRLRIW
SAGCSTGAEP YSLAILVHDL LGEALAEWSV TILGTDLSAA ALATARAAEF GPWALRTLDT
EERARWFRRT PARPGLPHGG YALRPAFRRM VRFERQNLLG LIDGSDRIQG SFDLILCRNV
LIYFSPDHVN RIVRALGERL DARGWLLIGH AEPNPTFSQW LQPVALPGTV AYRPIDTPTT
EPPPVLVPAR PDAVPIPLAP LPAFVAVEPA APMPEPIGIP IPLPAEPATE HPLSPGDLLA
EIRVLADSGE TARAWRRLHE EIESYATDPA LRYYEGLLAL DLGREREAER ALRGALFLDR
GFVMAHFQLG LLLARAGRRG EAARALDNAL RLAQGLSPET ILPEGDGVSA ARLAESARRA
LAGITVSEA
|
|---|
| |