Gene Smed_5115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5115 
Symbol 
ID5319417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp67040 
End bp68398 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content63% 
IMG OID640776893 
Productprotein-glutamate O-methyltransferase 
Protein accessionYP_001313825 
Protein GI150377230 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.466931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0136698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGGGC GCGCGCCGTC GTTGAAACTT GCTGAACAGG TTGCAGGGAG GATCGGCCTG 
AGCCTTCCGG CATCCCGGAA GCGAGCGGTC GCTTCGGCGA TCGACCGCAT GATGGTGCAG
CGCGGCATTG GCGAGGGTCG ATCGCTTCTC GCCCGGCTGG GGTTCGACGA AGATTTGACC
GATGAGGCCA TTTCGGCGGT TACGGTCGCA GAAACGCATT TCTTCCGGGG ACCTGACCAA
TTCCAAGTGA TACGGCAAGC TATCCTTCCC GAACTGCTGC GACGGCGCCC GGACGGCTCT
CCTCTGAGTA TCTGGAGCCT CGGCTGCGCA ACGGGGGAGG AACCGTACTC CCTTGCTATT
CTCTGCGATG AGGACGATCT TCTGGACGAT GTGCGGATAA GCGCGGCCGA CGTTTCGCGA
AGGGCGCTCG TCACGGCCCG GGAAGCCGAA TACGGCGAAT GGGCCTTGAG GAATACGGGT
CCGAGGCTGA GACAACGGTA CTTCGATGCG AGCGGAGGGC GGTATCGCCT GAATGAGCGT
TTGCGCCGGC AGGTGGATTT CGCTCATCTG AACCTCGGTG CAGACGCGCT TCCGTCTCCG
CAATCGGGAT TGGCCGACTT CGATCTGATC CTTTGCCGTA ACGTGCTCGT TTATTTCGAG
GCAAGCGCGG TATCTCGCAT CGCCGGCCAA CTTCTGGCCT GCCTGTCCGA TGGCGGGTGG
CTGCTGACGG CTCCGACTGA CCCGCCCTTA TGGAAATACG CCGCGTTCGA AACGTCGATC
ACGCCCGCGG GCGTCGTTTA CCGGCGAATG GCTCGTTCGA AGATCCAAAA GAACTCGACC
GCGTGCACGG CCCCCCTTCG ACACCAGAAA AGGAGACCTG CCGCGGGTAG GATGCTGGGT
CGGACAAGCT TCGACACGCC GAAAGCGGTC GGCGATGATC CCGCCGAGGC TGTCACCCGG
CAGATTCGCT TGCTTTTCGA CAGAGGCAAT CCACGCGAGG CCGGGCGCCT TGCCGCGCAC
GCGATCGAAA CGCACCCGCT CTCGGCGGAA TTGCACTTCC TTCGGGGGGT CTCCGAGATG
GCCAGCGGGG AGACCGACGC GGCGGCAGCG GCGCTCCGCC GGGTCGTTTA TCTGGACAGC
AATCTGGCCG CCGCTCAGTT CTTTCTCGGT GTCTGCCTTA AGCACAGCGA TCCGAAGGCC
GCCCTGCGCG CCCTCGAGAA TGCGCTCTCC TCTTGCCTCT CTCGTCCCCC CCGCGAACGC
GTTGCGTTGA TGTGCGAGGC GACGGCGGAA CATCTCGCGC AGCGTGCTTG GCGAGAGATC
GGCCAGCTTC AACGACATCT CGGGAGCGAA GCCGGATGA
 
Protein sequence
MSGRAPSLKL AEQVAGRIGL SLPASRKRAV ASAIDRMMVQ RGIGEGRSLL ARLGFDEDLT 
DEAISAVTVA ETHFFRGPDQ FQVIRQAILP ELLRRRPDGS PLSIWSLGCA TGEEPYSLAI
LCDEDDLLDD VRISAADVSR RALVTAREAE YGEWALRNTG PRLRQRYFDA SGGRYRLNER
LRRQVDFAHL NLGADALPSP QSGLADFDLI LCRNVLVYFE ASAVSRIAGQ LLACLSDGGW
LLTAPTDPPL WKYAAFETSI TPAGVVYRRM ARSKIQKNST ACTAPLRHQK RRPAAGRMLG
RTSFDTPKAV GDDPAEAVTR QIRLLFDRGN PREAGRLAAH AIETHPLSAE LHFLRGVSEM
ASGETDAAAA ALRRVVYLDS NLAAAQFFLG VCLKHSDPKA ALRALENALS SCLSRPPRER
VALMCEATAE HLAQRAWREI GQLQRHLGSE AG