| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1011 |
|---|
| Symbol | cheR-1 |
|---|
| ID | 5137355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1048179 |
|---|
| End bp | 1049024 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640532469 |
|---|
| Product | chemotaxis protein methyltransferase CheR |
|---|
| Protein accession | YP_001216957 |
|---|
| Protein GI | 147674925 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGA TTGTCATTAC CGATACTGAC TTCTGCCGAT TCCGTGATTA TTTTTATCAA
AAAACAGGCA TTTTTTTTGA GAACAGCAAA CGTTATTTTG TTGATAAACG CTTATTACAG
CGCATTGAAT TAACCGAACA CCAAAGTTTT CGTGGTTATT TTACTTATCT ACGCTTTCAA
GCCAGCGGAG AAGAGCTGCA AGCCGTTATC AACGCACTCA CCGTCAATGA AACCTATTTT
TTCCGCGAGA TCAGTCAGTT GGAGTCCTTG GTTGAAGAGG TTTTGGATGA CATCGTACGC
CATAGGCCAG GTGAGCTAAT ACGCATATGG TCTATGCCCT GTTCTAGTGG CGAAGAGCCC
TATTCAATTG TGCTGTTTTT ACTGGAACAT TGGCCAAAGC TAGAACAGGT CGATATTGAA
ATTATCGCCT CAGATATTGA TACCGGCATT TTACAAAAAG CAGCACAAGG TATTTTCAGT
GCTCGTTCTG TTAAAAATTT ACCCAATAGT TCTCTCAACA AATATTTCAG CTTACGGGCT
GATGGCAGTT ACCAATTAAT TGACGATATT CGTCAATCGG TACGTTTTAC TCAAACTAAC
CTCAACAACC GAGCAGAAGT TCAAAAATTA GGCGCTATGG ATGTTATTTT TTGCCGAAAT
CTGTTGATTT ATTTTGATGA TATTTCGCGC CGTAACGCAG TGGAATCTTT TTACGAGCAA
CTCAATCCCG GTGGTGTTCT CTTCCTCGGC CACTCAGAGT CGATGAGCCG TATATCCTCA
ATTTTTCATG TAAAACGCTT TCGTAAATCA ACGGGATACT ACAAACCGCA CAAGGGGAAA
AAGTGA
|
|---|
| Protein sequence | MNEIVITDTD FCRFRDYFYQ KTGIFFENSK RYFVDKRLLQ RIELTEHQSF RGYFTYLRFQ
ASGEELQAVI NALTVNETYF FREISQLESL VEEVLDDIVR HRPGELIRIW SMPCSSGEEP
YSIVLFLLEH WPKLEQVDIE IIASDIDTGI LQKAAQGIFS ARSVKNLPNS SLNKYFSLRA
DGSYQLIDDI RQSVRFTQTN LNNRAEVQKL GAMDVIFCRN LLIYFDDISR RNAVESFYEQ
LNPGGVLFLG HSESMSRISS IFHVKRFRKS TGYYKPHKGK K
|
|---|
| |