| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2459 |
|---|
| Symbol | |
|---|
| ID | 4014881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2563730 |
|---|
| End bp | 2565238 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637942124 |
|---|
| Product | MCP methyltransferase, CheR-type |
|---|
| Protein accession | YP_549276 |
|---|
| Protein GI | 91788324 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.143998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.100833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGCC AGGTCATGCC GGCGCAGTGG TCGCAGTTGA GCGAGCTCGT CGCCGGCACG
ATGGGGCTGC ATTTTCCGCG CGAGCGCTGG GATGATCTGA AGCGTGGCCT GATTGACGCA
GCGCAGGAGT TTGGCTTTGA GGACGCGGCA GCATGCATCG ACTGGCTGCT GTCGGCGCCA
CCGACCCGGG CGCAGCTCCA GGTGCTGGCA GGCCATCTCA CGGTCGGCGA AACCTATTTC
TTCCGGGACA GGCAAACGCT GGAGGTGCTC ACCGAGAGCA TATTGCCCGA GCTGATCCGT
GCCCGGCGCG GGGGAGAGCA GCGGCTGCGC ATCTGGAGCG CGGGTTGCTG CAGCGGCGAA
GAGCCTTATT CGCTGGCGAT CCTGCTGCAT GAAGCATTGC CCGATTTTGG AAACTGGCAG
GTGACGATCA CCGCGACCGA TATCAACCCG CGCTTTCTGC AAAAGGCTGT CGCAGGTGTC
TACGGCGAGT GGTCGTTCCG CAACGCACCA GCAGGACTCA AACAACATTA CTTCCACCGC
ACCGAAGATG GCCATTACAC CATCGTGCCG CAAATCAGGA AATTGGTGAA CTTTGCGCAC
CTGAACCTGG CGGAGGACGC TTATCCCTCG CTTGAGACCG ACACCAACGC GATGGATGTG
ATCTTCTGCC GCAATGTGCT GATGTACTTC ACGCCGCTAC AGACCCGCAA GGTGATCCGG
AATCTCCATC ATGCACTGGT CGAAGGCGGC TGGCTGGTGA TGAGTCCCAG CGAAGACTCA
AGTTCGTTGT TTCCAAACTT CGTCCCGGTG AATTTTCCCA GCGCGATCCT TTATCAAAAG
AGCGATGTCG CGCCTCGGAC CGAACCCGTA ACGGTGACAG CCAACGGCGC ACCGGAATCT
GGTTTTCCTG CGATCGAGAC GTCTTTGTCA TGGGAACCAT CGGCTGCCCC GGTGGCGGTT
TTCGAGTCCC TCCAGCCGAA GGAAGACCAC GCCGTGCCGG AGGCACCGGG CAGCGCCCTG
GCGTTTGCCC AATCGCTCTA CGAGCAGGGC CGTTATGCGG AAGTGGTTGA CACGTTGCTG
GCGGCCCTGG CCGAACATGC GCCCCTGACC GAGGCCTGTT CGTTGCTGGC CCGGGCACTG
GCCAATCAGG GCAGACTTGC CGACGCGCTG ACATGGTGCG ATCGATGGAT CGTCACCGAC
AAACTGGATC CCGCCGGCCA TTACCTGCGC GCGGGGGTTC TGCTGGAGCA GGGCGAGCTC
GAACAAGCGC GCTCCTCTCT CCAAAGGGCG ACCTATCTCG AACCCGGGTT TGTTCTGGCC
AATTTTGCGC TCGGTAATCT TGCGCGCAGG CGCGGCAAGA CCGGCGAAGC GGGCAAACAT
TTCGCCAATA CACTGCATCT GCTGCAAGGC TACCAACCGG GCGATCTTCT GCCCGAATCG
GACGGTCTCA CCGCCGGGCG TCTTGCGCAG ACCCTTGCTT CGCTCACCGA CCCGGAAATC
GCGCCATGA
|
|---|
| Protein sequence | MHGQVMPAQW SQLSELVAGT MGLHFPRERW DDLKRGLIDA AQEFGFEDAA ACIDWLLSAP
PTRAQLQVLA GHLTVGETYF FRDRQTLEVL TESILPELIR ARRGGEQRLR IWSAGCCSGE
EPYSLAILLH EALPDFGNWQ VTITATDINP RFLQKAVAGV YGEWSFRNAP AGLKQHYFHR
TEDGHYTIVP QIRKLVNFAH LNLAEDAYPS LETDTNAMDV IFCRNVLMYF TPLQTRKVIR
NLHHALVEGG WLVMSPSEDS SSLFPNFVPV NFPSAILYQK SDVAPRTEPV TVTANGAPES
GFPAIETSLS WEPSAAPVAV FESLQPKEDH AVPEAPGSAL AFAQSLYEQG RYAEVVDTLL
AALAEHAPLT EACSLLARAL ANQGRLADAL TWCDRWIVTD KLDPAGHYLR AGVLLEQGEL
EQARSSLQRA TYLEPGFVLA NFALGNLARR RGKTGEAGKH FANTLHLLQG YQPGDLLPES
DGLTAGRLAQ TLASLTDPEI AP
|
|---|
| |