| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0728 |
|---|
| Symbol | |
|---|
| ID | 5732614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 836835 |
|---|
| End bp | 838295 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641277858 |
|---|
| Product | TPR repeat-containing CheR-type MCP methyltransferase |
|---|
| Protein accession | YP_001543504 |
|---|
| Protein GI | 159897257 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGT TGAGCACTGA ACAATGGATG ATCATCCGCG ATTATCTGGC TCAACGGGCT
GGCTTATATC TCGATGATAG TCGTATGCGC CAAGGTCGTA TGCTTGTTCA GGAGCGTTAT
CGGCAATTAC AAATTAGCCC CGCTGCCTAT ACATTGCGAA TTCAAGACCC CACTAATGGC
GGCGAGTTGC AATGGTTGGC TGAACGCTTA GCTAACCATG AAACCCAATT TTTTCGCAAC
CCAGCCCATT TTCGAGCGTT GCGTGAGCAT ATTCTGCCTG AATTGCAGCG TTCGCGTTCG
CCCTTGCGAC CATTACGCTG TTGGAGTGCT GGCTGCTCAA CTGGCGAGGA ACCCTATAGC
ATGGCCATGG TGGCCTTGCA GCAATGGGGC AATCCGCCGA GCCGCCCAAT TTCGATTTGG
GCCACCGATT TGAGCAATGT GCCCTTGGAG CGAGCGATTG CCGCCGAGTA TCGTGGCCGT
TCGCTAACAA ATGTGCAAGC CGACTACAGA CAATGGTTTG AGCAGCAGGC CAACGGAGCG
TTGCGTGTCA GCGAAGCCGT GCGATCCTTG GTACAATTTG AGCAGCACAA TTTGCTGGAT
GCCCTGCCAC ATTGGGCCTA TCAACTTGAT GTGGTATTTT GCCAGAATGT CACGATCTAT
TTTCAGCTGG AAACATGTCG CCAATTGATC GAACGGATTT ATGCGGCGAT GGCGGTTGGT
GGCTATCTGC TCTTGGGCTT TTCCGAGTCG CTGTGGGGCA TTTTTGATCG CTTTGAAACG
GTCGAGGTGG CTGGGGCATT CATCTATCGC AAAGGCGATG GTCAGCCTAA ACCACGCCCC
AACTTGAGCG AAGGACCAAT CACCAAGCCG CTGAATAAGC CAGCCGAGCC AGTACCAGCG
CGGCCACGCC CAAGTACGCG GCCATTAGCG CCAGCCAGCC CAATTAAGCC GCCCGATGTG
ACGAGCTTGT TGGATGAAGC ACGGAAATTG CGCGGCCAAG GCCAGCAGCG ACGTGGATTA
AGCCTGTTGG CGAGTATTGC GCCCAACCAG CGCCAGCCAG CAATTTTGGC TTTAGCCGCG
CAATTGCACG CCGATCTTGG GCAGCATGAG CAAGCGGCGG CTGAGGCGCG GCGGGCATTA
GAGCTTGATG TGCTGCAAGA TGCTGCCTAT GTCGTGCTGG GCATGATTGA ACTCAATCAA
GGCGCATGGG ATAAAGCGAT TAATTATCTT GAGCGAGCCA GCTATTTAGT GCCCGATTCG
CCAACGATTG CCTTTCATTT AGCTGAAAGT TATCGCCATC AAGGGCGAGC AACCGCCGCC
TTACGTTATT ATCAACATGC CTTGCGCAAA TTGGCGCAGC ATTCAAGTAG TACGGTTATT
GATGGAATTG CCGTGGGGTG GCTGCGTTCT GCTTGTGAAC GCTGGATTGG CGGATTAGAA
GCCAGCCAAG GAACATTCTA A
|
|---|
| Protein sequence | MSELSTEQWM IIRDYLAQRA GLYLDDSRMR QGRMLVQERY RQLQISPAAY TLRIQDPTNG
GELQWLAERL ANHETQFFRN PAHFRALREH ILPELQRSRS PLRPLRCWSA GCSTGEEPYS
MAMVALQQWG NPPSRPISIW ATDLSNVPLE RAIAAEYRGR SLTNVQADYR QWFEQQANGA
LRVSEAVRSL VQFEQHNLLD ALPHWAYQLD VVFCQNVTIY FQLETCRQLI ERIYAAMAVG
GYLLLGFSES LWGIFDRFET VEVAGAFIYR KGDGQPKPRP NLSEGPITKP LNKPAEPVPA
RPRPSTRPLA PASPIKPPDV TSLLDEARKL RGQGQQRRGL SLLASIAPNQ RQPAILALAA
QLHADLGQHE QAAAEARRAL ELDVLQDAAY VVLGMIELNQ GAWDKAINYL ERASYLVPDS
PTIAFHLAES YRHQGRATAA LRYYQHALRK LAQHSSSTVI DGIAVGWLRS ACERWIGGLE
ASQGTF
|
|---|
| |