| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0647 |
|---|
| Symbol | cheR |
|---|
| ID | 2740478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 682084 |
|---|
| End bp | 682899 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637159523 |
|---|
| Product | chemotaxis protein methyltransferase |
|---|
| Protein accession | NP_971261 |
|---|
| Protein GI | 42526163 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.63831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATT TTTTAACTGA TCAAGAATTC CGTATGTTCA GCGATTTAAT ATATACCGCA
AGCGGTATTA CTTTTTCCGA TACTAATAGG TCTATTTTGG AAAGCAGGTT AAAAGAAAAA
CTTAGGGATA AGAAACTTGA AAAGGTGTCT GATTATTATG CGATGCTTAT GAAGGATTCG
GAAGAGCAAA AGAGCCTTTT AGACTCCGTT ACAACAAACC TTACAAGATT TTTTAGAAAT
CAGCCTCATT TTGATGCATT GGAAAATTAC GTTATACCTG AGCTTGTAAA GGTAAAAAAA
GCTGAAGGAA AGAATAAACT TAAAATATGG AGCGCCGGAT GTTCAACAGG GGAGGAGCCT
TATACCATAG CTATGGTTAT GAAAAAACAC CTTCCGATAG GATTTACTGC CGAAATTACA
GCCTCCGACT TATCCTTAAA ATGTCTTCTT GTCGGTAAGA CCGGCTTTTA CCAGGAATCC
AGAGTTACAG GAATACCTGA AGATTATTTG AAGCTTTATT TTGATAAGCT AAATGACGGT
TATCAGGTAA AAAAAGATAT AATGCAAATG GTGAATTTTG ACTATCATAA CTTAAAACAT
GACTCAAAAC ATACCGACTT TGATCTTGTG TTTTGCCGAA ATGTTTTGAT CTATTTTGAC
GAGCCTGTTC AAAAAGAGGT TATTGATAGG TTTTGGCGTG CTATGTCGCC TAAATCTTTT
TTATTTATAG GTCATTCCGA ATCTCTCTTT GGTATGGAAA CTCAATTTAA GTTTTTAAAA
ACGGATTGGG CTTGTTTTTA TCAAAAAGGG TTTTGA
|
|---|
| Protein sequence | MADFLTDQEF RMFSDLIYTA SGITFSDTNR SILESRLKEK LRDKKLEKVS DYYAMLMKDS
EEQKSLLDSV TTNLTRFFRN QPHFDALENY VIPELVKVKK AEGKNKLKIW SAGCSTGEEP
YTIAMVMKKH LPIGFTAEIT ASDLSLKCLL VGKTGFYQES RVTGIPEDYL KLYFDKLNDG
YQVKKDIMQM VNFDYHNLKH DSKHTDFDLV FCRNVLIYFD EPVQKEVIDR FWRAMSPKSF
LFIGHSESLF GMETQFKFLK TDWACFYQKG F
|
|---|
| |