More than 300 homologs were found in PanDaTox collection
for query gene Pcal_1183 on replicon NC_009073
Organism: Pyrobaculum calidifontis JCM 11548



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009073  Pcal_1183  AsnC family transcriptional regulator  100 
 
 
167 aa  338  2e-92  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_010525  Tneu_0849  AsnC family transcriptional regulator  83.83 
 
 
167 aa  292  2e-78  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal  0.688521 
 
 
-
 
NC_008701  Pisl_0997  AsnC family transcriptional regulator  82.42 
 
 
167 aa  284  4e-76  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.488133  normal  0.0113104 
 
 
-
 
NC_009376  Pars_1853  AsnC family transcriptional regulator  80.95 
 
 
168 aa  283  7e-76  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.199579  normal  0.332251 
 
 
-
 
NC_009954  Cmaq_0828  AsnC family transcriptional regulator  49.38 
 
 
164 aa  174  7e-43  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_007643  Rru_A0655  AsnC family transcriptional regulator  36.77 
 
 
196 aa  100  8e-21  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_0018  AsnC family transcriptional regulator  36.6 
 
 
170 aa  100  1e-20  Thermofilum pendens Hrk 5  Archaea  normal  0.443064  n/a   
 
 
-
 
NC_004310  BR1502  leucine-responsive regulatory protein  36.77 
 
 
156 aa  96.3  2e-19  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1452  leucine-responsive regulatory protein  36.77 
 
 
156 aa  96.3  2e-19  Brucella ovis ATCC 25840  Bacteria  normal  0.423592  n/a   
 
 
-
 
NC_009667  Oant_1662  AsnC family transcriptional regulator  36.77 
 
 
156 aa  96.3  2e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.070464  n/a   
 
 
-
 
NC_008048  Sala_1288  AsnC family transcriptional regulator  34.67 
 
 
157 aa  93.6  1e-18  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.890336  normal 
 
 
-
 
NC_011662  Tmz1t_0571  transcriptional regulator, AsnC family  32.91 
 
 
154 aa  93.2  2e-18  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2151  AsnC family transcriptional regulator  32.45 
 
 
180 aa  91.7  5e-18  Mycobacterium sp. KMS  Bacteria  normal  normal  0.132892 
 
 
-
 
NC_008146  Mmcs_2105  AsnC family transcriptional regulator  32.45 
 
 
180 aa  91.7  5e-18  Mycobacterium sp. MCS  Bacteria  normal  0.166182  n/a   
 
 
-
 
NC_009636  Smed_1249  AsnC family transcriptional regulator  31.61 
 
 
156 aa  88.6  3e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.0518927  normal  0.957765 
 
 
-
 
NC_009077  Mjls_2088  AsnC family transcriptional regulator  32.45 
 
 
180 aa  88.6  4e-17  Mycobacterium sp. JLS  Bacteria  normal  normal  0.162755 
 
 
-
 
NC_004311  BRA0723  proline dehydrogenase transcriptional activator  34.36 
 
 
164 aa  87.8  7e-17  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4016  AsnC family transcriptional regulator  31.13 
 
 
171 aa  87.8  7e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  decreased coverage  0.0056672 
 
 
-
 
NC_009511  Swit_4567  AsnC family transcriptional regulator  30.97 
 
 
158 aa  86.7  1e-16  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.328768 
 
 
-
 
NC_008254  Meso_1324  AsnC family transcriptional regulator  31.61 
 
 
150 aa  87  1e-16  Chelativorans sp. BNC1  Bacteria  normal  0.719808  n/a   
 
 
-
 
NC_009668  Oant_3847  AsnC family transcriptional regulator  33.13 
 
 
164 aa  85.9  2e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0682  AsnC family transcriptional regulator  35.95 
 
 
169 aa  86.3  2e-16  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.777023 
 
 
-
 
NC_011369  Rleg2_2720  transcriptional regulator, AsnC family  30.67 
 
 
155 aa  86.3  2e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.380031  normal 
 
 
-
 
NC_009831  Ssed_2126  leucine-responsive transcriptional regulator  33.11 
 
 
167 aa  85.5  3e-16  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000250913  normal  0.0385806 
 
 
-
 
NC_007973  Rmet_0741  AsnC family transcriptional regulator  33.77 
 
 
169 aa  85.1  4e-16  Cupriavidus metallidurans CH34  Bacteria  normal  0.703113  normal 
 
 
-
 
NC_010506  Swoo_2484  leucine-responsive transcriptional regulator  33.11 
 
 
167 aa  85.1  4e-16  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000151917  unclonable  0.000000015798 
 
 
-
 
NC_008726  Mvan_2356  AsnC family transcriptional regulator  31.13 
 
 
157 aa  85.1  4e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0125137 
 
 
-
 
NC_004578  PSPTO_0100  leucine-responsive regulatory protein  31.37 
 
 
162 aa  84.7  5e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3337  AsnC family transcriptional regulator  31.61 
 
 
166 aa  84.7  5e-16  Jannaschia sp. CCS1  Bacteria  normal  normal  0.993463 
 
 
-
 
NC_009832  Spro_3514  AsnC family transcriptional regulator  32.68 
 
 
153 aa  84.7  5e-16  Serratia proteamaculans 568  Bacteria  normal  0.0500665  normal  0.428471 
 
 
-
 
NC_012850  Rleg_2981  transcriptional regulator, AsnC family  30.07 
 
 
175 aa  84.3  7e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.033192 
 
 
-
 
NC_008254  Meso_2113  AsnC family transcriptional regulator  31.61 
 
 
157 aa  84.3  7e-16  Chelativorans sp. BNC1  Bacteria  normal  0.264729  n/a   
 
 
-
 
NC_007005  Psyr_0234  regulatory proteins, AsnC/Lrp  30.97 
 
 
162 aa  84.3  8e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0797  transcriptional regulator, AsnC family  34.44 
 
 
165 aa  84  9e-16  Ralstonia pickettii 12J  Bacteria  normal  0.163413  normal  0.817989 
 
 
-
 
NC_007794  Saro_0705  AsnC family transcriptional regulator  33.11 
 
 
156 aa  84  9e-16  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2805  transcriptional regulator, AsnC family  31.93 
 
 
158 aa  84  9e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0615  AsnC family transcriptional regulator  31.61 
 
 
166 aa  84  9e-16  Ruegeria sp. TM1040  Bacteria  normal  0.615736  normal 
 
 
-
 
NC_008686  Pden_0942  AsnC family transcriptional regulator  32.7 
 
 
154 aa  84  9e-16  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0868  transcriptional regulator, AsnC family  34.44 
 
 
165 aa  83.6  0.000000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.67384  normal  0.614838 
 
 
-
 
NC_009832  Spro_1682  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  83.2  0.000000000000001  Serratia proteamaculans 568  Bacteria  normal  0.94162  normal  0.324618 
 
 
-
 
NC_008709  Ping_3606  transcriptional regulator of AsnC/Lrp family protein  33.55 
 
 
155 aa  83.2  0.000000000000001  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5527  AsnC family transcriptional regulator  30.97 
 
 
162 aa  84  0.000000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.414864 
 
 
-
 
NC_011830  Dhaf_3542  transcriptional regulator, AsnC family  33.11 
 
 
157 aa  84  0.000000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000609578  n/a   
 
 
-
 
CP001509  ECD_00893  DNA-binding transcriptional dual regulator, leucine-binding  32.3 
 
 
164 aa  82.8  0.000000000000002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2754  transcriptional regulator, AsnC family  32.3 
 
 
164 aa  82.8  0.000000000000002  Escherichia coli DH1  Bacteria  hitchhiker  0.0000000328569  n/a   
 
 
-
 
NC_002947  PP_3654  AsnC family transcriptional regulator  33.13 
 
 
150 aa  82.8  0.000000000000002  Pseudomonas putida KT2440  Bacteria  normal  0.652565  normal  0.0825689 
 
 
-
 
NC_009901  Spea_2234  leucine-responsive transcriptional regulator  32.28 
 
 
167 aa  82.8  0.000000000000002  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.0000872232  n/a   
 
 
-
 
NC_009092  Shew_2025  leucine-responsive transcriptional regulator  32.28 
 
 
167 aa  82.8  0.000000000000002  Shewanella loihica PV-4  Bacteria  unclonable  0.00000000839293  unclonable  0.00000134482 
 
 
-
 
NC_009436  Ent638_1413  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.8  0.000000000000002  Enterobacter sp. 638  Bacteria  decreased coverage  0.0000135875  normal 
 
 
-
 
NC_007347  Reut_A2546  AsnC family transcriptional regulator  32.45 
 
 
167 aa  83.2  0.000000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0994  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.8  0.000000000000002  Escherichia coli HS  Bacteria  decreased coverage  0.0000000000000266294  n/a   
 
 
-
 
NC_010658  SbBS512_E2439  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.8  0.000000000000002  Shigella boydii CDC 3083-94  Bacteria  decreased coverage  0.0000000000889772  n/a   
 
 
-
 
NC_010498  EcSMS35_2231  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.8  0.000000000000002  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000028804  normal 
 
 
-
 
NC_011989  Avi_4324  transcriptional regulator AsnC family  31.01 
 
 
156 aa  82.8  0.000000000000002  Agrobacterium vitis S4  Bacteria  normal  0.0666799  n/a   
 
 
-
 
NC_012892  B21_00900  hypothetical protein  32.3 
 
 
164 aa  82.8  0.000000000000002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2076  AsnC family transcriptional regulator  33.13 
 
 
150 aa  82.8  0.000000000000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1742  leucine-responsive transcriptional regulator  33.33 
 
 
166 aa  82.8  0.000000000000002  Shewanella denitrificans OS217  Bacteria  decreased coverage  0.00000000110042  n/a   
 
 
-
 
NC_010468  EcolC_2707  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.8  0.000000000000002  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.0000640359  normal 
 
 
-
 
NC_008254  Meso_2886  AsnC family transcriptional regulator  32.45 
 
 
156 aa  83.2  0.000000000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1051  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.8  0.000000000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.0000229844  normal 
 
 
-
 
NC_008345  Sfri_1794  leucine-responsive transcriptional regulator  33.11 
 
 
165 aa  82.4  0.000000000000002  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000016537  n/a   
 
 
-
 
NC_013421  Pecwa_1986  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.8  0.000000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.64528  n/a   
 
 
-
 
NC_009801  EcE24377A_0964  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.8  0.000000000000002  Escherichia coli E24377A  Bacteria  decreased coverage  0.0000000000271902  n/a   
 
 
-
 
NC_012912  Dd1591_2361  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.4  0.000000000000003  Dickeya zeae Ech1591  Bacteria  normal  0.84534  n/a   
 
 
-
 
NC_013595  Sros_0181  putative transcriptional regulator, AsnC family  34.39 
 
 
150 aa  82.4  0.000000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5271  leucine-responsive regulatory protein  30.32 
 
 
162 aa  82.4  0.000000000000003  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2305  leucine-responsive transcriptional regulator  32.28 
 
 
168 aa  82  0.000000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2012  leucine-responsive transcriptional regulator  32.28 
 
 
168 aa  82  0.000000000000003  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000455922  n/a   
 
 
-
 
NC_007406  Nwi_2452  AsnC family transcriptional regulator  31.13 
 
 
170 aa  82  0.000000000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.591707 
 
 
-
 
NC_011989  Avi_3138  transcriptional regulator AsnC family  30.67 
 
 
155 aa  82.4  0.000000000000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0199  AsnC family transcriptional regulator  30.32 
 
 
162 aa  82.4  0.000000000000003  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00074926 
 
 
-
 
NC_011080  SNSL254_A0993  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.4  0.000000000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  decreased coverage  0.000182939  normal 
 
 
-
 
NC_009512  Pput_5181  AsnC family transcriptional regulator  30.32 
 
 
162 aa  82.4  0.000000000000003  Pseudomonas putida F1  Bacteria  normal  0.73265  normal  0.0995684 
 
 
-
 
NC_007964  Nham_2879  AsnC family transcriptional regulator  31.13 
 
 
159 aa  82  0.000000000000003  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0964  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.4  0.000000000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000000000969196  n/a   
 
 
-
 
NC_012917  PC1_1718  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.4  0.000000000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.159084  n/a   
 
 
-
 
NC_008321  Shewmr4_1962  leucine-responsive transcriptional regulator  32.28 
 
 
168 aa  82  0.000000000000003  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000351105  normal  0.663498 
 
 
-
 
NC_011205  SeD_A1024  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.4  0.000000000000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  unclonable  0.00000719526  normal 
 
 
-
 
NC_008322  Shewmr7_2014  leucine-responsive transcriptional regulator  32.28 
 
 
168 aa  82  0.000000000000003  Shewanella sp. MR-7  Bacteria  decreased coverage  0.0000513166  normal  0.0218506 
 
 
-
 
NC_011083  SeHA_C1058  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.4  0.000000000000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  decreased coverage  0.000658641  normal 
 
 
-
 
NC_014230  CA2559_05245  putative AsnC-family transcriptional regulator  32.67 
 
 
157 aa  82  0.000000000000003  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2261  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.4  0.000000000000003  Dickeya dadantii Ech703  Bacteria  normal  0.0124412  n/a   
 
 
-
 
NC_011094  SeSA_A1073  leucine-responsive transcriptional regulator  32.3 
 
 
164 aa  82.4  0.000000000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  decreased coverage  0.000166195  normal 
 
 
-
 
NC_009439  Pmen_0244  AsnC family transcriptional regulator  30.32 
 
 
162 aa  82.4  0.000000000000003  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2049  leucine-responsive transcriptional regulator  32.28 
 
 
168 aa  82  0.000000000000003  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0000202075  hitchhiker  0.00142974 
 
 
-
 
NC_010322  PputGB1_5323  AsnC family transcriptional regulator  30.32 
 
 
162 aa  82.4  0.000000000000003  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0644813 
 
 
-
 
NC_009997  Sbal195_2324  leucine-responsive transcriptional regulator  32.28 
 
 
168 aa  82  0.000000000000004  Shewanella baltica OS195  Bacteria  hitchhiker  0.000000733571  normal 
 
 
-
 
NC_010465  YPK_2686  leucine-responsive transcriptional regulator  32.92 
 
 
164 aa  82  0.000000000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.247423  n/a   
 
 
-
 
NC_009052  Sbal_2155  leucine-responsive transcriptional regulator  32.28 
 
 
168 aa  82  0.000000000000004  Shewanella baltica OS155  Bacteria  decreased coverage  0.00000000584376  n/a   
 
 
-
 
NC_009665  Shew185_2216  leucine-responsive transcriptional regulator  32.28 
 
 
168 aa  82  0.000000000000004  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000025021  n/a   
 
 
-
 
NC_014151  Cfla_0427  transcriptional regulator, AsnC family  33.13 
 
 
150 aa  81.6  0.000000000000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_2597  leucine-responsive transcriptional regulator  32.92 
 
 
164 aa  82  0.000000000000004  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000282665  n/a   
 
 
-
 
NC_010159  YpAngola_A1612  leucine-responsive transcriptional regulator  32.92 
 
 
164 aa  82  0.000000000000004  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000163573  normal 
 
 
-
 
NC_008700  Sama_1771  leucine-responsive transcriptional regulator  32.45 
 
 
167 aa  82  0.000000000000004  Shewanella amazonensis SB2B  Bacteria  unclonable  0.0000000022114  normal  0.0203642 
 
 
-
 
NC_011663  Sbal223_2190  leucine-responsive transcriptional regulator  32.28 
 
 
168 aa  82  0.000000000000004  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000625254  normal  0.0646213 
 
 
-
 
NC_008752  Aave_1158  AsnC family transcriptional regulator  33.11 
 
 
159 aa  81.6  0.000000000000004  Acidovorax citrulli AAC00-1  Bacteria  normal  0.15264  normal 
 
 
-
 
NC_010322  PputGB1_2253  AsnC family transcriptional regulator  33.74 
 
 
150 aa  81.6  0.000000000000004  Pseudomonas putida GB-1  Bacteria  normal  normal  0.41621 
 
 
-
 
NC_008700  Sama_0605  DNA-binding transcriptional regulator AsnC  33.77 
 
 
153 aa  82  0.000000000000004  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.132523 
 
 
-
 
NC_008048  Sala_1393  AsnC family transcriptional regulator  32.03 
 
 
159 aa  81.6  0.000000000000005  Sphingopyxis alaskensis RB2256  Bacteria  hitchhiker  0.00371319  normal 
 
 
-
 
NC_012029  Hlac_1179  transcriptional regulator, AsnC family  32.67 
 
 
149 aa  81.6  0.000000000000005  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  hitchhiker  0.000178537 
 
 
-
 
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