Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1179 |
Symbol | |
ID | 7400988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1184864 |
End bp | 1185313 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643708244 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_002565843 |
Protein GI | 222479606 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000178537 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAACTCG ACGAGACGGA TCGCGCGATC CTCCGAATCT TACAGGAGGA CGCCCGGACG CCGTTCTCGG AGGTCGCACG CCGCATCGAC ATGTCGAGTG CGACCGTTCA TGACCGGGTG AATCGCATGG AGGAGGCGGG AGTCATCGAG GGATACCACG CTGCGGTCGA CCCGAAGGCG GTCGGCTACG GCGTCAGCGC CTTCGTCGGC CTCCGGGTCG AACAGGGGCG CGAGGAGGAC GCACTCGAAC GGCTCCGCGA GATCGGCGGC GTTCGCGAGA TCCACCTGAC CACCGGGGAG TGGGACGTGA TGCTCAAAGT CGTCGCTACG GACACGGACA GCCTCCGCGA GCTGATGTTC GAGAGCGTTG GGGAGATGGA CGGATTCTCC CGGTCGCAGA CGATGATCAT CCTCGGGACG GACTACGAGG CGAACGGGCC ACCGGTCTGA
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Protein sequence | MELDETDRAI LRILQEDART PFSEVARRID MSSATVHDRV NRMEEAGVIE GYHAAVDPKA VGYGVSAFVG LRVEQGREED ALERLREIGG VREIHLTTGE WDVMLKVVAT DTDSLRELMF ESVGEMDGFS RSQTMIILGT DYEANGPPV
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