Gene Pisl_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0997 
Symbol 
ID4617876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp895450 
End bp895953 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content42% 
IMG OID639784095 
ProductAsnC family transcriptional regulator 
Protein accessionYP_930515 
Protein GI119872508 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.488133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0113104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGAGA TAGACCGCAG GTTAGTAGTA TTATTACAGG CAGATGGTAG AAAGACATTA 
CAAGAACTAA GCGAAGAATT AAAGAAACCT AAAACTACAA TTGCAGCCCG TATAAAAAAG
TTAGAAAGTG AAGGCATCAT AATGGGCTAT AAGGCTGTGA TAAACCCGTT TACATTAGGT
TATAAGTTGT TGGCTTTTGT GTTAGTTAGC GTACGGAGAG GCGTTGCTCA CAAGGAGAAT
AAGCCGCTAC AACTTGAAGT TGCCGAAAGA GTGCTTGCAG AATGCAACGG CGAGAGAGGG
ATGCCGTTTG TAGAAGAGGC CTATATTATA ACAGGACCCT ACGACCTCCT TTTCAAAGTC
TGGGCGAGAG ATATTAAACA GCTCTCTACG TTTCTAGTAA CCTATCTAGC CTCAAACCAA
GATATCCAAC GTACTGAGAC GTTTATTGTT CTAGAGATTG TAGACGACTG GCGGAAGCGG
GTAATGCCCC CTTCAACTAT ATAG
 
Protein sequence
MDEIDRRLVV LLQADGRKTL QELSEELKKP KTTIAARIKK LESEGIIMGY KAVINPFTLG 
YKLLAFVLVS VRRGVAHKEN KPLQLEVAER VLAECNGERG MPFVEEAYII TGPYDLLFKV
WARDIKQLST FLVTYLASNQ DIQRTETFIV LEIVDDWRKR VMPPSTI