Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0994 |
Symbol | lrp |
ID | 5592914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 992943 |
End bp | 993437 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640920165 |
Product | leucine-responsive transcriptional regulator |
Protein accession | YP_001457730 |
Protein GI | 157160412 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000000000266294 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGATA GCAAGAAGCG CCCTGGCAAA GATCTCGACC GTATCGATCG TAACATTCTT AATGAGTTGC AAAAGGATGG GCGTATTTCT AACGTCGAGC TTTCTAAACG TGTGGGACTT TCCCCAACGC CGTGCCTTGA GCGTGTGCGT CGGCTGGAAA GACAAGGGTT TATTCAGGGC TATACGGCGC TGCTTAACCC CCATTATCTG GATGCATCAC TTCTGGTATT CGTTGAGATT ACTCTGAATC GTGGCGCACC GGATGTGTTT GAACAATTCA ATACCGCTGT ACAAAAACTT GAAGAAATTC AGGAGTGTCA TTTAGTATCC GGTGATTTCG ACTACCTGTT GAAAACACGC GTGCCGGATA TGTCAGCCTA CCGTAAGTTG CTGGGGGAAA CCCTGCTGCG TCTGCCTGGC GTCAATGACA CACGGACATA CGTTGTTATG GAAGAAGTCA AGCAGAGTAA TCGTCTGGTT ATTAAGACGC GCTAA
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Protein sequence | MVDSKKRPGK DLDRIDRNIL NELQKDGRIS NVELSKRVGL SPTPCLERVR RLERQGFIQG YTALLNPHYL DASLLVFVEI TLNRGAPDVF EQFNTAVQKL EEIQECHLVS GDFDYLLKTR VPDMSAYRKL LGETLLRLPG VNDTRTYVVM EEVKQSNRLV IKTR
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