| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0797 |
|---|
| Symbol | |
|---|
| ID | 6288750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 844347 |
|---|
| End bp | 844844 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642624361 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_001898380 |
|---|
| Protein GI | 187927893 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.163413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.817989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACCC AGCGTAAGCC AGTCCGGGCC CTCGATAAGC TCGATCGGCG GATTCTCGAC
CTGCTGCAAA AGGACGGGCG CCTGTCGATG AAGGAACTCT CCGAGGCGGT CGGCCTGACC
ATTACGCCGT GCATCGAGCG CGTCAAGCGC CTGGAGCGCG AGGGCTTCAT CCTCGGCTAC
TACGCGCGGC TCAACCCCGC CATGCTGGGC GCTTCGCTGC TGGTGTTTGT GGAGATCAGC
CTGGGCAGCA AATCCGGCAA CATGTTCGAA CAGTTTCGTC GCGAAGTGCT GCGCATTCCC
GAGGTGCTGG AGTGCCACCT CGTCTCCGGC GATTTCGACT ACCTCATCAA GGCGCGCATT
CGCGAGATGA GTGAATACCG GCGCTTGCTG GGCGACATCC TGCTCCAGTT GCCCGGCGCA
GTGCAATCCA AGAGCTACAT CGTGATGGAG GAGATCAAGG AGACGCTCGC CATCGATGTG
ACGGAAGCGG GCGGGTGA
|
|---|
| Protein sequence | MRTQRKPVRA LDKLDRRILD LLQKDGRLSM KELSEAVGLT ITPCIERVKR LEREGFILGY
YARLNPAMLG ASLLVFVEIS LGSKSGNMFE QFRREVLRIP EVLECHLVSG DFDYLIKARI
REMSEYRRLL GDILLQLPGA VQSKSYIVME EIKETLAIDV TEAGG
|
|---|
| |