Gene Swit_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0682 
Symbol 
ID5196125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp745526 
End bp746035 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content67% 
IMG OID640580226 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001261187 
Protein GI148553605 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.777023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAGG CCGATAGCGC CGACCGCCCG GGAAAGGGGC GCATGGACAA GATCGACCGC 
AAGATACTCG CCGAACTGGA GCGCGACGCG AAGCAGCCCC TCGTCGCGCT CAGCGAGACG
ATCGGCCTGT CGAAGACGCC CTGCTGGGCG CGCGTCCAGG AACTCGAGCG ATCGGGCGCG
ATCCTCGGCT ATCATGCCGA ACTGTCGCCG CCCGCTTTGG GCCTGGTCGT CACCGCCTAT
ATCGAGGTGG TGATCGAATC GTCGCGGCGC GCCGAGTTCG AGGAGGCCGC CATCCGATCC
CCGGTGGTGA TCGAATGCCT GACGATGGCC GGCGCGGCCG ATTACATGAT CAAGATCCAC
TGCCGCGACG TCGCCCAGCT CGACAGCATA TTGCGCTACG ACCTGACGCT GCTACCCGGC
GTCCAGCATA CCAAGACGAC GATCTGCCTG AAGTCGATCA AGACCGGCGG GTCGCTGGCC
GAAGCCGCGG CGGCGCTCGC CGCGCAATAG
 
Protein sequence
MAQADSADRP GKGRMDKIDR KILAELERDA KQPLVALSET IGLSKTPCWA RVQELERSGA 
ILGYHAELSP PALGLVVTAY IEVVIESSRR AEFEEAAIRS PVVIECLTMA GAADYMIKIH
CRDVAQLDSI LRYDLTLLPG VQHTKTTICL KSIKTGGSLA EAAAALAAQ