| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0828 |
|---|
| Symbol | |
|---|
| ID | 5709860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 869679 |
|---|
| End bp | 870173 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641275331 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001540653 |
|---|
| Protein GI | 159041401 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATG AATTAGATAT TAAAATCCTG GAATCCCTGC AAAGAAATGG GAGAATCACA
GTATCCAGGT TAGCTGAGTT ACTTAATAAA CCTAGGACAA CGATAATGAG TAGATTAGCC
CGATTAGAGT CAAGTAAAAT AATATTGGGC TATAAGACTG TTATTGACCC AATTCAAATG
GGTTATACGA TACAGGCTTA TGTCCTCTTA ACAGTCAGGA GAGTTCCTGG GGCGACTAAG
CCTAGTCAAG TCGCCTTAGC TGAGAGGATA ATATATGATT CAGATAATGA AAAGGACCTA
CCCTGGGTTG AGGAGGCTCA GGTTGTTACT GGGCAATATG ACTTAGTGCT TAAGGTTTGG
GCCAAGGACC TTAAGCAGCT CTCAAACTTT CTAATAAGAT ACCTACCCAC GCACCCGGAT
GTGGTTAAGT CTGAGACCAT GATTGTTCTT GAGAACGTGG CCACTTGGAG AAATAGGAAC
ATGCCTATTA GGTAG
|
|---|
| Protein sequence | MMDELDIKIL ESLQRNGRIT VSRLAELLNK PRTTIMSRLA RLESSKIILG YKTVIDPIQM
GYTIQAYVLL TVRRVPGATK PSQVALAERI IYDSDNEKDL PWVEEAQVVT GQYDLVLKVW
AKDLKQLSNF LIRYLPTHPD VVKSETMIVL ENVATWRNRN MPIR
|
|---|
| |