More than 300 homologs were found in PanDaTox collection
for query gene Pden_0942 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_0942  AsnC family transcriptional regulator  100 
 
 
154 aa  317  3.9999999999999996e-86  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3495  AsnC family transcriptional regulator  60.26 
 
 
176 aa  189  2e-47  Jannaschia sp. CCS1  Bacteria  normal  normal  0.0302787 
 
 
-
 
NC_009428  Rsph17025_2327  AsnC family transcriptional regulator  56.76 
 
 
151 aa  178  2e-44  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0714715  normal 
 
 
-
 
NC_007493  RSP_2165  AsnC family transcriptional regulator  55.41 
 
 
151 aa  175  2e-43  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.653585  n/a   
 
 
-
 
NC_009049  Rsph17029_0837  AsnC family transcriptional regulator  55.41 
 
 
158 aa  175  2e-43  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0388954  normal 
 
 
-
 
NC_007794  Saro_0705  AsnC family transcriptional regulator  54.61 
 
 
156 aa  174  5e-43  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4856  transcriptional regulator, AsnC family  53.74 
 
 
164 aa  173  7e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00513546  normal  0.170919 
 
 
-
 
NC_011368  Rleg2_5293  transcriptional regulator, AsnC family  54.17 
 
 
164 aa  172  1.9999999999999998e-42  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.848277  normal  0.172988 
 
 
-
 
NC_008048  Sala_2774  AsnC family transcriptional regulator  56.85 
 
 
156 aa  172  1.9999999999999998e-42  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.587297 
 
 
-
 
NC_008044  TM1040_1694  AsnC family transcriptional regulator  56.64 
 
 
158 aa  169  1e-41  Ruegeria sp. TM1040  Bacteria  normal  0.43137  normal  0.666184 
 
 
-
 
NC_011989  Avi_4324  transcriptional regulator AsnC family  51.02 
 
 
156 aa  161  3e-39  Agrobacterium vitis S4  Bacteria  normal  0.0666799  n/a   
 
 
-
 
NC_009668  Oant_3847  AsnC family transcriptional regulator  53.15 
 
 
164 aa  160  4.0000000000000004e-39  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0723  proline dehydrogenase transcriptional activator  53.15 
 
 
164 aa  160  6e-39  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2050  AsnC family transcriptional regulator  51.75 
 
 
150 aa  160  6e-39  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1324  AsnC family transcriptional regulator  51.72 
 
 
150 aa  160  8.000000000000001e-39  Chelativorans sp. BNC1  Bacteria  normal  0.719808  n/a   
 
 
-
 
NC_007643  Rru_A0655  AsnC family transcriptional regulator  53.06 
 
 
196 aa  159  1e-38  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3448  AsnC family transcriptional regulator  49.66 
 
 
156 aa  157  6e-38  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0711543  normal 
 
 
-
 
NC_011662  Tmz1t_0571  transcriptional regulator, AsnC family  51.72 
 
 
154 aa  152  1e-36  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1494  leucine-responsive transcriptional regulator  42.38 
 
 
164 aa  134  3.0000000000000003e-31  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000000974852  n/a   
 
 
-
 
NC_008345  Sfri_1794  leucine-responsive transcriptional regulator  41.72 
 
 
165 aa  134  5e-31  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000016537  n/a   
 
 
-
 
NC_010506  Swoo_2484  leucine-responsive transcriptional regulator  43.05 
 
 
167 aa  134  6.0000000000000005e-31  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000151917  unclonable  0.000000015798 
 
 
-
 
NC_009783  VIBHAR_01796  leucine-responsive transcriptional regulator  42.67 
 
 
164 aa  132  9.999999999999999e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_2234  leucine-responsive transcriptional regulator  43.05 
 
 
167 aa  132  9.999999999999999e-31  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.0000872232  n/a   
 
 
-
 
NC_011205  SeD_A1024  leucine-responsive transcriptional regulator  42.38 
 
 
164 aa  132  1.9999999999999998e-30  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  unclonable  0.00000719526  normal 
 
 
-
 
NC_012880  Dd703_2261  leucine-responsive transcriptional regulator  42.38 
 
 
164 aa  132  1.9999999999999998e-30  Dickeya dadantii Ech703  Bacteria  normal  0.0124412  n/a   
 
 
-
 
NC_011083  SeHA_C1058  leucine-responsive transcriptional regulator  42.38 
 
 
164 aa  132  1.9999999999999998e-30  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  decreased coverage  0.000658641  normal 
 
 
-
 
NC_011149  SeAg_B0964  leucine-responsive transcriptional regulator  42.38 
 
 
164 aa  132  1.9999999999999998e-30  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000000000969196  n/a   
 
 
-
 
NC_011094  SeSA_A1073  leucine-responsive transcriptional regulator  42.38 
 
 
164 aa  132  1.9999999999999998e-30  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  decreased coverage  0.000166195  normal 
 
 
-
 
NC_011080  SNSL254_A0993  leucine-responsive transcriptional regulator  42.38 
 
 
164 aa  132  1.9999999999999998e-30  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  decreased coverage  0.000182939  normal 
 
 
-
 
NC_009092  Shew_2025  leucine-responsive transcriptional regulator  43.05 
 
 
167 aa  132  1.9999999999999998e-30  Shewanella loihica PV-4  Bacteria  unclonable  0.00000000839293  unclonable  0.00000134482 
 
 
-
 
NC_012917  PC1_1718  leucine-responsive transcriptional regulator  42.38 
 
 
164 aa  132  1.9999999999999998e-30  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.159084  n/a   
 
 
-
 
NC_012912  Dd1591_2361  leucine-responsive transcriptional regulator  42.38 
 
 
164 aa  132  1.9999999999999998e-30  Dickeya zeae Ech1591  Bacteria  normal  0.84534  n/a   
 
 
-
 
NC_013456  VEA_003880  leucine-responsive regulatory protein  42 
 
 
164 aa  132  1.9999999999999998e-30  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00000693258  n/a   
 
 
-
 
NC_009831  Ssed_2126  leucine-responsive transcriptional regulator  42.38 
 
 
167 aa  131  3e-30  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000250913  normal  0.0385806 
 
 
-
 
NC_013421  Pecwa_1986  leucine-responsive transcriptional regulator  41.72 
 
 
164 aa  131  3.9999999999999996e-30  Pectobacterium wasabiae WPP163  Bacteria  normal  0.64528  n/a   
 
 
-
 
NC_008700  Sama_1771  leucine-responsive transcriptional regulator  41.72 
 
 
167 aa  130  5e-30  Shewanella amazonensis SB2B  Bacteria  unclonable  0.0000000022114  normal  0.0203642 
 
 
-
 
CP001509  ECD_00893  DNA-binding transcriptional dual regulator, leucine-binding  41.72 
 
 
164 aa  130  6.999999999999999e-30  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2754  transcriptional regulator, AsnC family  41.72 
 
 
164 aa  130  6.999999999999999e-30  Escherichia coli DH1  Bacteria  hitchhiker  0.0000000328569  n/a   
 
 
-
 
NC_009801  EcE24377A_0964  leucine-responsive transcriptional regulator  41.72 
 
 
164 aa  130  6.999999999999999e-30  Escherichia coli E24377A  Bacteria  decreased coverage  0.0000000000271902  n/a   
 
 
-
 
NC_010498  EcSMS35_2231  leucine-responsive transcriptional regulator  41.72 
 
 
164 aa  130  6.999999999999999e-30  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000028804  normal 
 
 
-
 
NC_011353  ECH74115_1051  leucine-responsive transcriptional regulator  41.72 
 
 
164 aa  130  6.999999999999999e-30  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.0000229844  normal 
 
 
-
 
NC_009800  EcHS_A0994  leucine-responsive transcriptional regulator  41.72 
 
 
164 aa  130  6.999999999999999e-30  Escherichia coli HS  Bacteria  decreased coverage  0.0000000000000266294  n/a   
 
 
-
 
NC_009436  Ent638_1413  leucine-responsive transcriptional regulator  41.72 
 
 
164 aa  130  6.999999999999999e-30  Enterobacter sp. 638  Bacteria  decreased coverage  0.0000135875  normal 
 
 
-
 
NC_010658  SbBS512_E2439  leucine-responsive transcriptional regulator  41.72 
 
 
164 aa  130  6.999999999999999e-30  Shigella boydii CDC 3083-94  Bacteria  decreased coverage  0.0000000000889772  n/a   
 
 
-
 
NC_010468  EcolC_2707  leucine-responsive transcriptional regulator  41.72 
 
 
164 aa  130  6.999999999999999e-30  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.0000640359  normal 
 
 
-
 
NC_012892  B21_00900  hypothetical protein  41.72 
 
 
164 aa  130  6.999999999999999e-30  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1742  leucine-responsive transcriptional regulator  43.36 
 
 
166 aa  130  9e-30  Shewanella denitrificans OS217  Bacteria  decreased coverage  0.00000000110042  n/a   
 
 
-
 
NC_009832  Spro_1682  leucine-responsive transcriptional regulator  41.72 
 
 
164 aa  130  9e-30  Serratia proteamaculans 568  Bacteria  normal  0.94162  normal  0.324618 
 
 
-
 
NC_011312  VSAL_I1840  leucine-responsive transcriptional regulator  41.06 
 
 
163 aa  129  2.0000000000000002e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.757131  n/a   
 
 
-
 
NC_010465  YPK_2686  leucine-responsive transcriptional regulator  42.67 
 
 
164 aa  127  5.0000000000000004e-29  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.247423  n/a   
 
 
-
 
NC_009708  YpsIP31758_2597  leucine-responsive transcriptional regulator  42.67 
 
 
164 aa  127  5.0000000000000004e-29  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000282665  n/a   
 
 
-
 
NC_010159  YpAngola_A1612  leucine-responsive transcriptional regulator  42.67 
 
 
164 aa  127  5.0000000000000004e-29  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000163573  normal 
 
 
-
 
NC_011663  Sbal223_2190  leucine-responsive transcriptional regulator  41.72 
 
 
168 aa  127  7.000000000000001e-29  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000625254  normal  0.0646213 
 
 
-
 
NC_009997  Sbal195_2324  leucine-responsive transcriptional regulator  41.72 
 
 
168 aa  127  7.000000000000001e-29  Shewanella baltica OS195  Bacteria  hitchhiker  0.000000733571  normal 
 
 
-
 
NC_009052  Sbal_2155  leucine-responsive transcriptional regulator  41.72 
 
 
168 aa  127  7.000000000000001e-29  Shewanella baltica OS155  Bacteria  decreased coverage  0.00000000584376  n/a   
 
 
-
 
NC_009665  Shew185_2216  leucine-responsive transcriptional regulator  41.72 
 
 
168 aa  127  7.000000000000001e-29  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000025021  n/a   
 
 
-
 
NC_004347  SO_2305  leucine-responsive transcriptional regulator  41.72 
 
 
168 aa  126  9.000000000000001e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2012  leucine-responsive transcriptional regulator  41.72 
 
 
168 aa  126  9.000000000000001e-29  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000455922  n/a   
 
 
-
 
NC_008577  Shewana3_2049  leucine-responsive transcriptional regulator  41.72 
 
 
168 aa  126  9.000000000000001e-29  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0000202075  hitchhiker  0.00142974 
 
 
-
 
NC_008321  Shewmr4_1962  leucine-responsive transcriptional regulator  41.72 
 
 
168 aa  126  9.000000000000001e-29  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000351105  normal  0.663498 
 
 
-
 
NC_008322  Shewmr7_2014  leucine-responsive transcriptional regulator  41.72 
 
 
168 aa  126  9.000000000000001e-29  Shewanella sp. MR-7  Bacteria  decreased coverage  0.0000513166  normal  0.0218506 
 
 
-
 
NC_008309  HS_1187  leucine-responsive transcriptional regulator  41.22 
 
 
158 aa  124  5e-28  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3606  transcriptional regulator of AsnC/Lrp family protein  42.25 
 
 
155 aa  120  5e-27  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2760  leucine-responsive transcriptional regulator  38.67 
 
 
158 aa  119  9.999999999999999e-27  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1569  AsnC family transcriptional regulator  42.28 
 
 
172 aa  119  9.999999999999999e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.194361  normal  0.155211 
 
 
-
 
NC_010681  Bphyt_2981  transcriptional regulator, AsnC family  39.58 
 
 
162 aa  118  1.9999999999999998e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.160309  hitchhiker  0.00904587 
 
 
-
 
NC_009832  Spro_3514  AsnC family transcriptional regulator  43.45 
 
 
153 aa  118  3e-26  Serratia proteamaculans 568  Bacteria  normal  0.0500665  normal  0.428471 
 
 
-
 
NC_007973  Rmet_0741  AsnC family transcriptional regulator  40 
 
 
169 aa  117  3.9999999999999996e-26  Cupriavidus metallidurans CH34  Bacteria  normal  0.703113  normal 
 
 
-
 
NC_013730  Slin_2901  transcriptional regulator, AsnC family  41.96 
 
 
154 aa  117  4.9999999999999996e-26  Spirosoma linguale DSM 74  Bacteria  normal  0.225499  normal 
 
 
-
 
NC_009439  Pmen_0244  AsnC family transcriptional regulator  40.28 
 
 
162 aa  117  6e-26  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_1596  AsnC family transcriptional regulator  40.4 
 
 
153 aa  117  7e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.699626  n/a   
 
 
-
 
NC_004310  BR1571  leucine-responsive regulatory protein  40.4 
 
 
153 aa  116  9e-26  Brucella suis 1330  Bacteria  normal  0.787387  n/a   
 
 
-
 
NC_009505  BOV_1518  leucine-responsive regulatory protein  40.4 
 
 
153 aa  116  9e-26  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0223  leucine-responsive regulatory protein  37.33 
 
 
162 aa  116  9.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  0.396703  n/a   
 
 
-
 
NC_008836  BMA10229_A0924  leucine-responsive regulatory protein  37.33 
 
 
162 aa  116  9.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0407  leucine-responsive regulatory protein  37.33 
 
 
162 aa  116  9.999999999999999e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2550  leucine-responsive regulatory protein  37.33 
 
 
162 aa  116  9.999999999999999e-26  Burkholderia mallei SAVP1  Bacteria  normal  0.678942  n/a   
 
 
-
 
NC_013422  Hneap_2390  transcriptional regulator, AsnC family  40.69 
 
 
166 aa  116  9.999999999999999e-26  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2924  leucine-responsive regulatory protein  37.33 
 
 
162 aa  116  9.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.518607  n/a   
 
 
-
 
NC_007434  BURPS1710b_2973  leucine-responsive regulatory protein  37.33 
 
 
162 aa  116  9.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6082  leucine-responsive regulatory protein  40.69 
 
 
162 aa  116  9.999999999999999e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1657  leucine-responsive regulatory protein  37.33 
 
 
162 aa  116  9.999999999999999e-26  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2863  leucine-responsive regulatory protein  37.33 
 
 
162 aa  116  9.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  0.437935  n/a   
 
 
-
 
NC_007951  Bxe_A1002  AsnC family transcriptional regulator  38 
 
 
162 aa  116  9.999999999999999e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.782239 
 
 
-
 
NC_008463  PA14_70080  leucine-responsive regulatory protein  40.69 
 
 
162 aa  116  9.999999999999999e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2546  AsnC family transcriptional regulator  39.58 
 
 
167 aa  115  1.9999999999999998e-25  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0868  transcriptional regulator, AsnC family  38.89 
 
 
165 aa  115  1.9999999999999998e-25  Ralstonia pickettii 12D  Bacteria  normal  0.67384  normal  0.614838 
 
 
-
 
NC_011365  Gdia_0882  transcriptional regulator, AsnC family  38.73 
 
 
152 aa  115  1.9999999999999998e-25  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0213  AsnC family transcriptional regulator  40.97 
 
 
153 aa  115  1.9999999999999998e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.757841 
 
 
-
 
NC_010622  Bphy_0766  AsnC family transcriptional regulator  38.67 
 
 
162 aa  115  1.9999999999999998e-25  Burkholderia phymatum STM815  Bacteria  normal  normal  0.364193 
 
 
-
 
NC_008228  Patl_2461  leucine-responsive transcriptional regulator  37.09 
 
 
161 aa  115  1.9999999999999998e-25  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.000000018296  n/a   
 
 
-
 
NC_008048  Sala_1361  AsnC family transcriptional regulator  39.16 
 
 
167 aa  115  3e-25  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.658235  normal 
 
 
-
 
NC_009654  Mmwyl1_4392  AsnC family transcriptional regulator  42.67 
 
 
158 aa  115  3e-25  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0797  transcriptional regulator, AsnC family  38.89 
 
 
165 aa  115  3e-25  Ralstonia pickettii 12J  Bacteria  normal  0.163413  normal  0.817989 
 
 
-
 
NC_004578  PSPTO_0100  leucine-responsive regulatory protein  39.58 
 
 
162 aa  114  3.9999999999999997e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0234  regulatory proteins, AsnC/Lrp  39.58 
 
 
162 aa  114  5e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_03072  leucine responsive regulatory protein  39.31 
 
 
159 aa  113  7.999999999999999e-25  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5271  leucine-responsive regulatory protein  38.89 
 
 
162 aa  112  1.0000000000000001e-24  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0199  AsnC family transcriptional regulator  38.89 
 
 
162 aa  112  1.0000000000000001e-24  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00074926 
 
 
-
 
NC_009512  Pput_5181  AsnC family transcriptional regulator  38.89 
 
 
162 aa  112  1.0000000000000001e-24  Pseudomonas putida F1  Bacteria  normal  0.73265  normal  0.0995684 
 
 
-
 
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