Gene VSAL_I1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1840 
Symbollrp 
ID6988229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp1973473 
End bp1973964 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content38% 
IMG OID643380139 
Productleucine-responsive transcriptional regulator 
Protein accessionYP_002263236 
Protein GI209695307 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.757131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGATA ATAAGAAACC GTCCAAGGAC CTGGATCGTA TCGATCGCAA TATTTTGAAT 
GAACTCCAAA AAGATGGCCG AATTTCAAAT GTTGAATTAT CTAAGAGAGT AGGGTTATCT 
CCTACTCCAT GTTTAGAGCG CGTTCGTCGT TTAGAACGCC AAGGGTATAT TAATGGCTAT 
ACGGCATTAC TAAACCCACA GTATCTTGAT GCATCATTGT TAGTATTTGT TGAAATCACA 
TTAAACCGTG GTGCTCCAGA TGTTTTCGAA CAATTTAATG TTGCAGTGCA GTTATTAGAT 
GATATTCAAG AGTGTCACTT AGTTTCAGGT GATTTTGATT ATCTTTTAAA GACTCGTGTA 
TCAGATATGA GTGCTTATCG CCGATTACTT GGTGATACAC TATTACGTCT TCCGGGAGTT 
AACGACACAC GTACTTACGT GGTTATGGAA GAGGTTAAAC AGACGAATAA TTTAGTGATT 
AAAACGCGCT AG
 
Protein sequence
MVDNKKPSKD LDRIDRNILN ELQKDGRISN VELSKRVGLS PTPCLERVRR LERQGYINGY 
TALLNPQYLD ASLLVFVEIT LNRGAPDVFE QFNVAVQLLD DIQECHLVSG DFDYLLKTRV 
SDMSAYRRLL GDTLLRLPGV NDTRTYVVME EVKQTNNLVI KTR