Gene VEA_003880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003880 
Symbol 
ID8557615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2510963 
End bp2511457 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content44% 
IMG OID646406977 
Productleucine-responsive regulatory protein 
Protein accessionYP_003286505 
Protein GI262394651 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000693258 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACA ACTATAAAAA GCCGTCCAAG GAACTAGACC GTATCGACCG CAACATTCTT 
AATGAACTGC AGAAAGACGG TCGTATTTCA AACGTTGAGC TTTCAAAACG TGTGGGACTT 
TCTCCAACGC CATGTTTGGA GCGTGTACGT CGCTTAGAGC GTCAGGGTTA CATCACAGGA 
TACACTGCAT TATTGAATCC GCAGTTCCTG GATGCGTCAC TATTAGTATT CGTTGAGATT 
ACATTAAACC GTGGTGCGCC GGATGTATTT GAGCAGTTTA ACTCAGCTGT TCAAAAGCTA 
GACGACATAC AAGAGTGTCA TCTTGTATCA GGTGACTTTG ACTATCTTCT TAAAACCCGT 
GTATCAGATA TGGGTGCTTA CCGCCGACTA TTGGGCGATA CGTTACTACG TCTACCTGGC 
GTAAATGACA CTCGCACATA CGTTGTAATG GAAGAAGTGA AACAATCTAA CCAGCTTGTG 
ATCAAAACTC GTTAA
 
Protein sequence
MADNYKKPSK ELDRIDRNIL NELQKDGRIS NVELSKRVGL SPTPCLERVR RLERQGYITG 
YTALLNPQFL DASLLVFVEI TLNRGAPDVF EQFNSAVQKL DDIQECHLVS GDFDYLLKTR 
VSDMGAYRRL LGDTLLRLPG VNDTRTYVVM EEVKQSNQLV IKTR