Gene Patl_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2461 
Symbol 
ID4174215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2990939 
End bp2991424 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID638055477 
Productleucine-responsive transcriptional regulator 
Protein accessionYP_662031 
Protein GI109898776 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000018296 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATAA AAACACCGAA ACACCTCGAT AGAATCGATC GCAATATTTT AAGTGAGCTG 
CAAAAGAACG GCCGTTTATC AAATATCGAT TTAGCCAATA AGGTCGGTCT AAGTGCAAGT 
CCTTGTTTAG AAAGAGTTAA ACGTCTTGAG AGTCAAGGCT ATATTCTAGG CTATCATGCG 
CGAGTCGACC CACAAAAACT CGGTGCGGCG ATGTTAGTCT TCGTGGAAAT TACGTTGACC 
AAAACGTCGC CTGATATCTT TGAGCTATTT TCTACTGCGG TAAAACAGCA TGAAGACATC 
CAAGAGTGTC ATTTAGTCTC TGGTGATTTT GATTTTTTAC TTAAAGCGCG AGTGGCGGAC 
ATGTCGACCT ATCGTAAGTT GCTTGGTGAC ACCCTACTTA GATTACCAGG AGTGAATGAA 
TCTCGAACTT ACGTTGTAAT GGAAGAAGTC AAAGACACCA CCATGGTGAA AATTAATCAA 
CGCTGA
 
Protein sequence
MLIKTPKHLD RIDRNILSEL QKNGRLSNID LANKVGLSAS PCLERVKRLE SQGYILGYHA 
RVDPQKLGAA MLVFVEITLT KTSPDIFELF STAVKQHEDI QECHLVSGDF DFLLKARVAD 
MSTYRKLLGD TLLRLPGVNE SRTYVVMEEV KDTTMVKINQ R