More than 300 homologs were found in PanDaTox collection
for query gene Xaut_3448 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_3448  AsnC family transcriptional regulator  100 
 
 
156 aa  316  6e-86  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0711543  normal 
 
 
-
 
NC_011989  Avi_4324  transcriptional regulator AsnC family  72.48 
 
 
156 aa  226  6e-59  Agrobacterium vitis S4  Bacteria  normal  0.0666799  n/a   
 
 
-
 
NC_004311  BRA0723  proline dehydrogenase transcriptional activator  73.1 
 
 
164 aa  218  1.9999999999999999e-56  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5293  transcriptional regulator, AsnC family  68.49 
 
 
164 aa  218  3e-56  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.848277  normal  0.172988 
 
 
-
 
NC_009668  Oant_3847  AsnC family transcriptional regulator  72.41 
 
 
164 aa  217  3.9999999999999997e-56  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4856  transcriptional regulator, AsnC family  66.45 
 
 
164 aa  216  1e-55  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00513546  normal  0.170919 
 
 
-
 
NC_007794  Saro_0705  AsnC family transcriptional regulator  66.89 
 
 
156 aa  215  1e-55  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_2774  AsnC family transcriptional regulator  64.24 
 
 
156 aa  201  4e-51  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.587297 
 
 
-
 
NC_007802  Jann_3495  AsnC family transcriptional regulator  62.67 
 
 
176 aa  199  1.9999999999999998e-50  Jannaschia sp. CCS1  Bacteria  normal  normal  0.0302787 
 
 
-
 
NC_008740  Maqu_2050  AsnC family transcriptional regulator  58.9 
 
 
150 aa  191  4e-48  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1694  AsnC family transcriptional regulator  57.14 
 
 
158 aa  183  9e-46  Ruegeria sp. TM1040  Bacteria  normal  0.43137  normal  0.666184 
 
 
-
 
NC_007493  RSP_2165  AsnC family transcriptional regulator  61.38 
 
 
151 aa  179  1e-44  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.653585  n/a   
 
 
-
 
NC_009049  Rsph17029_0837  AsnC family transcriptional regulator  61.38 
 
 
158 aa  179  1e-44  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0388954  normal 
 
 
-
 
NC_009428  Rsph17025_2327  AsnC family transcriptional regulator  60.69 
 
 
151 aa  177  2.9999999999999997e-44  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0714715  normal 
 
 
-
 
NC_008254  Meso_1324  AsnC family transcriptional regulator  60 
 
 
150 aa  177  4e-44  Chelativorans sp. BNC1  Bacteria  normal  0.719808  n/a   
 
 
-
 
NC_007643  Rru_A0655  AsnC family transcriptional regulator  57.14 
 
 
196 aa  167  5e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0571  transcriptional regulator, AsnC family  53.79 
 
 
154 aa  159  2e-38  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0942  AsnC family transcriptional regulator  49.66 
 
 
154 aa  157  6e-38  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4408  proline-responsive regulatory protein  49.66 
 
 
158 aa  138  3e-32  Colwellia psychrerythraea 34H  Bacteria  normal  0.982858  n/a   
 
 
-
 
NC_009636  Smed_2574  AsnC family transcriptional regulator  46.94 
 
 
154 aa  136  1e-31  Sinorhizobium medicae WSM419  Bacteria  normal  0.0518335  normal  0.327443 
 
 
-
 
NC_011205  SeD_A1024  leucine-responsive transcriptional regulator  44.06 
 
 
164 aa  134  5e-31  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  unclonable  0.00000719526  normal 
 
 
-
 
NC_011094  SeSA_A1073  leucine-responsive transcriptional regulator  44.06 
 
 
164 aa  134  5e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  decreased coverage  0.000166195  normal 
 
 
-
 
NC_011149  SeAg_B0964  leucine-responsive transcriptional regulator  44.06 
 
 
164 aa  134  5e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000000000969196  n/a   
 
 
-
 
NC_011080  SNSL254_A0993  leucine-responsive transcriptional regulator  44.06 
 
 
164 aa  134  5e-31  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  decreased coverage  0.000182939  normal 
 
 
-
 
NC_011083  SeHA_C1058  leucine-responsive transcriptional regulator  44.06 
 
 
164 aa  134  5e-31  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  decreased coverage  0.000658641  normal 
 
 
-
 
NC_008228  Patl_2461  leucine-responsive transcriptional regulator  43.45 
 
 
161 aa  133  7.000000000000001e-31  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.000000018296  n/a   
 
 
-
 
NC_012917  PC1_1718  leucine-responsive transcriptional regulator  44.06 
 
 
164 aa  133  8e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.159084  n/a   
 
 
-
 
NC_012880  Dd703_2261  leucine-responsive transcriptional regulator  44.06 
 
 
164 aa  133  8e-31  Dickeya dadantii Ech703  Bacteria  normal  0.0124412  n/a   
 
 
-
 
NC_012912  Dd1591_2361  leucine-responsive transcriptional regulator  44.06 
 
 
164 aa  133  8e-31  Dickeya zeae Ech1591  Bacteria  normal  0.84534  n/a   
 
 
-
 
CP001509  ECD_00893  DNA-binding transcriptional dual regulator, leucine-binding  43.36 
 
 
164 aa  132  9.999999999999999e-31  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2754  transcriptional regulator, AsnC family  43.36 
 
 
164 aa  132  9.999999999999999e-31  Escherichia coli DH1  Bacteria  hitchhiker  0.0000000328569  n/a   
 
 
-
 
NC_009052  Sbal_2155  leucine-responsive transcriptional regulator  44.76 
 
 
168 aa  132  9.999999999999999e-31  Shewanella baltica OS155  Bacteria  decreased coverage  0.00000000584376  n/a   
 
 
-
 
NC_010468  EcolC_2707  leucine-responsive transcriptional regulator  43.36 
 
 
164 aa  132  9.999999999999999e-31  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.0000640359  normal 
 
 
-
 
NC_009997  Sbal195_2324  leucine-responsive transcriptional regulator  44.76 
 
 
168 aa  132  9.999999999999999e-31  Shewanella baltica OS195  Bacteria  hitchhiker  0.000000733571  normal 
 
 
-
 
NC_009801  EcE24377A_0964  leucine-responsive transcriptional regulator  43.36 
 
 
164 aa  132  9.999999999999999e-31  Escherichia coli E24377A  Bacteria  decreased coverage  0.0000000000271902  n/a   
 
 
-
 
NC_009901  Spea_2234  leucine-responsive transcriptional regulator  44.06 
 
 
167 aa  133  9.999999999999999e-31  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.0000872232  n/a   
 
 
-
 
NC_009436  Ent638_1413  leucine-responsive transcriptional regulator  43.36 
 
 
164 aa  132  9.999999999999999e-31  Enterobacter sp. 638  Bacteria  decreased coverage  0.0000135875  normal 
 
 
-
 
NC_010658  SbBS512_E2439  leucine-responsive transcriptional regulator  43.36 
 
 
164 aa  132  9.999999999999999e-31  Shigella boydii CDC 3083-94  Bacteria  decreased coverage  0.0000000000889772  n/a   
 
 
-
 
NC_010498  EcSMS35_2231  leucine-responsive transcriptional regulator  43.36 
 
 
164 aa  132  9.999999999999999e-31  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000028804  normal 
 
 
-
 
NC_012892  B21_00900  hypothetical protein  43.36 
 
 
164 aa  132  9.999999999999999e-31  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1051  leucine-responsive transcriptional regulator  43.36 
 
 
164 aa  132  9.999999999999999e-31  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.0000229844  normal 
 
 
-
 
NC_009665  Shew185_2216  leucine-responsive transcriptional regulator  44.76 
 
 
168 aa  132  9.999999999999999e-31  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000025021  n/a   
 
 
-
 
NC_008700  Sama_1771  leucine-responsive transcriptional regulator  44.06 
 
 
167 aa  132  9.999999999999999e-31  Shewanella amazonensis SB2B  Bacteria  unclonable  0.0000000022114  normal  0.0203642 
 
 
-
 
NC_013421  Pecwa_1986  leucine-responsive transcriptional regulator  43.36 
 
 
164 aa  132  9.999999999999999e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  0.64528  n/a   
 
 
-
 
NC_011663  Sbal223_2190  leucine-responsive transcriptional regulator  44.76 
 
 
168 aa  132  9.999999999999999e-31  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000625254  normal  0.0646213 
 
 
-
 
NC_009832  Spro_1682  leucine-responsive transcriptional regulator  43.36 
 
 
164 aa  132  9.999999999999999e-31  Serratia proteamaculans 568  Bacteria  normal  0.94162  normal  0.324618 
 
 
-
 
NC_009800  EcHS_A0994  leucine-responsive transcriptional regulator  43.36 
 
 
164 aa  132  9.999999999999999e-31  Escherichia coli HS  Bacteria  decreased coverage  0.0000000000000266294  n/a   
 
 
-
 
NC_009438  Sputcn32_2012  leucine-responsive transcriptional regulator  44.76 
 
 
168 aa  132  1.9999999999999998e-30  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000455922  n/a   
 
 
-
 
NC_008577  Shewana3_2049  leucine-responsive transcriptional regulator  44.76 
 
 
168 aa  132  1.9999999999999998e-30  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0000202075  hitchhiker  0.00142974 
 
 
-
 
NC_004347  SO_2305  leucine-responsive transcriptional regulator  44.76 
 
 
168 aa  132  1.9999999999999998e-30  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009511  Swit_1115  AsnC family transcriptional regulator  48.95 
 
 
164 aa  132  1.9999999999999998e-30  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.266621 
 
 
-
 
NC_008321  Shewmr4_1962  leucine-responsive transcriptional regulator  44.76 
 
 
168 aa  132  1.9999999999999998e-30  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000351105  normal  0.663498 
 
 
-
 
NC_008322  Shewmr7_2014  leucine-responsive transcriptional regulator  44.76 
 
 
168 aa  132  1.9999999999999998e-30  Shewanella sp. MR-7  Bacteria  decreased coverage  0.0000513166  normal  0.0218506 
 
 
-
 
NC_009783  VIBHAR_01796  leucine-responsive transcriptional regulator  43.06 
 
 
164 aa  131  3e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2025  leucine-responsive transcriptional regulator  44.06 
 
 
167 aa  131  3e-30  Shewanella loihica PV-4  Bacteria  unclonable  0.00000000839293  unclonable  0.00000134482 
 
 
-
 
NC_009831  Ssed_2126  leucine-responsive transcriptional regulator  43.36 
 
 
167 aa  131  3.9999999999999996e-30  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000250913  normal  0.0385806 
 
 
-
 
NC_010506  Swoo_2484  leucine-responsive transcriptional regulator  43.36 
 
 
167 aa  131  3.9999999999999996e-30  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000151917  unclonable  0.000000015798 
 
 
-
 
NC_003910  CPS_2760  leucine-responsive transcriptional regulator  42.66 
 
 
158 aa  130  5e-30  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003880  leucine-responsive regulatory protein  42.36 
 
 
164 aa  130  6e-30  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00000693258  n/a   
 
 
-
 
NC_009708  YpsIP31758_2597  leucine-responsive transcriptional regulator  43.06 
 
 
164 aa  130  6.999999999999999e-30  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000282665  n/a   
 
 
-
 
NC_010159  YpAngola_A1612  leucine-responsive transcriptional regulator  43.06 
 
 
164 aa  130  6.999999999999999e-30  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000163573  normal 
 
 
-
 
NC_010465  YPK_2686  leucine-responsive transcriptional regulator  43.06 
 
 
164 aa  130  6.999999999999999e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.247423  n/a   
 
 
-
 
NC_008345  Sfri_1794  leucine-responsive transcriptional regulator  42.66 
 
 
165 aa  130  7.999999999999999e-30  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000016537  n/a   
 
 
-
 
NC_009457  VC0395_A1494  leucine-responsive transcriptional regulator  42.66 
 
 
164 aa  130  9e-30  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000000974852  n/a   
 
 
-
 
NC_011312  VSAL_I1840  leucine-responsive transcriptional regulator  40.79 
 
 
163 aa  130  9e-30  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.757131  n/a   
 
 
-
 
NC_009439  Pmen_0244  AsnC family transcriptional regulator  41.22 
 
 
162 aa  129  2.0000000000000002e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1442  transcriptional regulator, AsnC family  46.94 
 
 
151 aa  126  9.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1742  leucine-responsive transcriptional regulator  40.79 
 
 
166 aa  126  1.0000000000000001e-28  Shewanella denitrificans OS217  Bacteria  decreased coverage  0.00000000110042  n/a   
 
 
-
 
NC_012560  Avin_48000  leucin responsive regulatory protein  40.69 
 
 
162 aa  126  1.0000000000000001e-28  Azotobacter vinelandii DJ  Bacteria  normal  0.964771  n/a   
 
 
-
 
NC_007347  Reut_A2546  AsnC family transcriptional regulator  43.06 
 
 
167 aa  125  2.0000000000000002e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6082  leucine-responsive regulatory protein  40.69 
 
 
162 aa  125  2.0000000000000002e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_70080  leucine-responsive regulatory protein  40.69 
 
 
162 aa  125  2.0000000000000002e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3320  AsnC family transcriptional regulator  47.92 
 
 
170 aa  125  2.0000000000000002e-28  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.0097323  normal 
 
 
-
 
NC_010511  M446_2201  AsnC family transcriptional regulator  49.32 
 
 
156 aa  125  3e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.0411716  normal  0.420331 
 
 
-
 
NC_013422  Hneap_2390  transcriptional regulator, AsnC family  40.69 
 
 
166 aa  125  3e-28  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0100  leucine-responsive regulatory protein  40.14 
 
 
162 aa  125  3e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_1187  leucine-responsive transcriptional regulator  42.66 
 
 
158 aa  125  3e-28  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0234  regulatory proteins, AsnC/Lrp  40.14 
 
 
162 aa  124  4.0000000000000003e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5527  AsnC family transcriptional regulator  39.07 
 
 
162 aa  124  7e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.414864 
 
 
-
 
NC_007948  Bpro_0399  AsnC family transcriptional regulator  45.52 
 
 
159 aa  124  7e-28  Polaromonas sp. JS666  Bacteria  normal  normal  0.318604 
 
 
-
 
NC_008709  Ping_3606  transcriptional regulator of AsnC/Lrp family protein  42.36 
 
 
155 aa  123  8.000000000000001e-28  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5271  leucine-responsive regulatory protein  40 
 
 
162 aa  123  9e-28  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009622  Smed_6457  AsnC family transcriptional regulator  42.07 
 
 
158 aa  123  9e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.545436 
 
 
-
 
NC_010322  PputGB1_5323  AsnC family transcriptional regulator  40 
 
 
162 aa  123  9e-28  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0644813 
 
 
-
 
NC_009512  Pput_5181  AsnC family transcriptional regulator  40 
 
 
162 aa  123  9e-28  Pseudomonas putida F1  Bacteria  normal  0.73265  normal  0.0995684 
 
 
-
 
NC_010501  PputW619_0199  AsnC family transcriptional regulator  40 
 
 
162 aa  123  9e-28  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00074926 
 
 
-
 
NC_010682  Rpic_0797  transcriptional regulator, AsnC family  40.28 
 
 
165 aa  122  1e-27  Ralstonia pickettii 12J  Bacteria  normal  0.163413  normal  0.817989 
 
 
-
 
NC_009076  BURPS1106A_2924  leucine-responsive regulatory protein  39.58 
 
 
162 aa  122  2e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  0.518607  n/a   
 
 
-
 
NC_012856  Rpic12D_0868  transcriptional regulator, AsnC family  40.28 
 
 
165 aa  122  2e-27  Ralstonia pickettii 12D  Bacteria  normal  0.67384  normal  0.614838 
 
 
-
 
NC_007434  BURPS1710b_2973  leucine-responsive regulatory protein  39.58 
 
 
162 aa  122  2e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1657  leucine-responsive regulatory protein  39.58 
 
 
162 aa  122  2e-27  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2419  AsnC family transcriptional regulator  45.58 
 
 
159 aa  122  2e-27  Acidovorax sp. JS42  Bacteria  normal  0.370827  normal  0.408785 
 
 
-
 
NC_008048  Sala_1361  AsnC family transcriptional regulator  43.05 
 
 
167 aa  122  2e-27  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.658235  normal 
 
 
-
 
NC_009074  BURPS668_2863  leucine-responsive regulatory protein  39.58 
 
 
162 aa  122  2e-27  Burkholderia pseudomallei 668  Bacteria  normal  0.437935  n/a   
 
 
-
 
NC_011138  MADE_02115  leucine-responsive transcriptional regulator  43.94 
 
 
144 aa  122  2e-27  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.0000100067  n/a   
 
 
-
 
NC_011992  Dtpsy_1428  transcriptional regulator, AsnC family  45.58 
 
 
159 aa  122  2e-27  Acidovorax ebreus TPSY  Bacteria  normal  0.92008  n/a   
 
 
-
 
NC_007973  Rmet_0741  AsnC family transcriptional regulator  41.67 
 
 
169 aa  121  3e-27  Cupriavidus metallidurans CH34  Bacteria  normal  0.703113  normal 
 
 
-
 
NC_011071  Smal_0443  transcriptional regulator, AsnC family  39.31 
 
 
159 aa  121  3e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4392  AsnC family transcriptional regulator  42.48 
 
 
158 aa  120  5e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2239  AsnC family transcriptional regulator  38.89 
 
 
162 aa  120  8e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
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