Gene Pcal_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1183 
Symbol 
ID4909555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp1100257 
End bp1100760 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content58% 
IMG OID640124937 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001056074 
Protein GI126459796 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGG TAGACAGAAA GATATTGATG GCCCTTCAGG CTGACGGCAA GAAGACTCTG 
CAGGAGCTAA GCGAGGAGCT GGGTAGGCCT AAGACCACCC TGGCGGCGAG AATTAAGAAG 
CTGGAGGAGG AAGGCGTAAT ACTGGGCTAC AAGGCGGTGG TCAACCCCTT CGCCCTCGGC 
TACAAGCTAC TCGCCTTCGT CCTCGTCAGC GTTAGAAGAG GCGCCTCCGC CGAGTCAAAA 
CCTCTCCAAC AGGCAGTGGC GGAGAAGGTC TTACAGGAGT GCAACGGCGA AGGAGGCATG 
CCCTTCGTAG AAGAGGCCTA CATAATAACG GGGCCCTACG ACCTCTTATT CAAAGTCTGG 
GCGAGGGACG TGAAACAGCT CTCCACGTTC CTAGTGGCGT ATCTGGCCTC CAACCCCGAC 
ATACAGCGCA CCGAGACGCT GATCGTGCTA GAGATCGTGG ATGACTGGCG TAGGCGCGTA 
ATGCCGCCCT CACAGCCTGC CTAA
 
Protein sequence
MDEVDRKILM ALQADGKKTL QELSEELGRP KTTLAARIKK LEEEGVILGY KAVVNPFALG 
YKLLAFVLVS VRRGASAESK PLQQAVAEKV LQECNGEGGM PFVEEAYIIT GPYDLLFKVW 
ARDVKQLSTF LVAYLASNPD IQRTETLIVL EIVDDWRRRV MPPSQPA