More than 300 homologs were found in PanDaTox collection
for query gene PG1258 on replicon NC_002950
Organism: Porphyromonas gingivalis W83



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002950  PG1258  DNA-binding protein HU  100 
 
 		 92 aa  185  2e-46  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_014230  CA2559_02675  DNA-binding protein HU  61.96 
 
 		 97 aa  121  4e-27  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_1534  histone family protein DNA-binding protein  60.87 
 
 		 96 aa  117  7.999999999999999e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  0.926041  n/a   
 
 
-
 
NC_008255  CHU_3687  DNA-binding protein HU  61.63 
 
 		 110 aa  112  1.0000000000000001e-24  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_0128  histone family protein DNA-binding protein  54.35 
 
 		 100 aa  110  6e-24  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_4435  histone family protein DNA-binding protein  54.95 
 
 		 101 aa  110  9e-24  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.90338  normal  1 
 
 
-
 
NC_013730  Slin_5982  histone family protein DNA-binding protein  55.56 
 
 		 100 aa  109  1.0000000000000001e-23  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.946495 
 
 
-
 
NC_013162  Coch_1479  histone family protein DNA-binding protein  56.67 
 
 		 104 aa  109  1.0000000000000001e-23  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_0938  histone family protein DNA-binding protein  48.35 
 
 		 95 aa  95.9  2e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  38.89 
 
 		 90 aa  75.5  0.0000000000002  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  38.89 
 
 		 90 aa  75.5  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  40 
 
 		 91 aa  75.1  0.0000000000003  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_010830  Aasi_0154  histone family DNA-binding protein  40 
 
 		 95 aa  75.1  0.0000000000003  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010831  Cphamn1_1992  histone family protein DNA-binding protein  42.22 
 
 		 99 aa  74.7  0.0000000000004  Chlorobium phaeobacteroides BS1  Bacteria  decreased coverage  0.0074793  normal  0.250036 
 
 
-
 
NC_011146  Gbem_1996  histone family protein DNA-binding protein  41.57 
 
 		 92 aa  74.7  0.0000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  42.35 
 
 		 90 aa  74.7  0.0000000000004  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_012918  GM21_2224  histone family protein DNA-binding protein  41.57 
 
 		 92 aa  74.7  0.0000000000004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000923552 
 
 
-
 
NC_009483  Gura_2622  histone family protein DNA-binding protein  41.18 
 
 		 92 aa  73.6  0.0000000000009  Geobacter uraniireducens Rf4  Bacteria  normal  0.349381  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_012034  Athe_2511  histone family protein DNA-binding protein  35.29 
 
 		 92 aa  72  0.000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000006954  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_011059  Paes_1786  histone family protein DNA-binding protein  40 
 
 		 103 aa  72.4  0.000000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.0401434 
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  38.89 
 
 		 90 aa  72.4  0.000000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_007517  Gmet_1417  histone-like DNA-binding protein  39.33 
 
 		 91 aa  71.6  0.000000000004  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000053245  normal  0.466182 
 
 
-
 
NC_007963  Csal_2043  histone-like DNA-binding protein  42.35 
 
 		 90 aa  71.2  0.000000000004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_0135  histone family protein DNA-binding protein  37.36 
 
 		 91 aa  70.9  0.000000000006  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00267128  n/a   
 
 
-
 
NC_011060  Ppha_0461  histone family protein DNA-binding protein  42.86 
 
 		 102 aa  70.1  0.000000000009  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.376006  n/a   
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  41.18 
 
 		 90 aa  69.7  0.00000000001  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_009831  Ssed_1544  histone family protein DNA-binding protein  40 
 
 		 90 aa  69.7  0.00000000001  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.000000007734  hitchhiker  0.000745392 
 
 
-
 
NC_007912  Sde_1611  nucleoid protein HU beta subunit  40 
 
 		 90 aa  70.1  0.00000000001  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000132089  normal  1 
 
 
-
 
NC_008789  Hhal_0600  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  69.7  0.00000000001  Halorhodospira halophila SL1  Bacteria  normal  0.0791658  n/a   
 
 
-
 
NC_013206  Aaci_3021  histone family protein DNA-binding protein  35.16 
 
 		 91 aa  69.7  0.00000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_011060  Ppha_1426  histone family protein DNA-binding protein  42.86 
 
 		 102 aa  70.1  0.00000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008639  Cpha266_0238  histone family protein DNA-binding protein  40 
 
 		 91 aa  69.7  0.00000000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_1468  DNA-binding protein HU beta subunit  40.96 
 
 		 91 aa  69.3  0.00000000001  Psychromonas ingrahamii 37  Bacteria  normal  0.961834  normal  0.643607 
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  40.45 
 
 		 94 aa  68.9  0.00000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_002939  GSU1521  integration host factor, alpha subunit  38.2 
 
 		 91 aa  69.3  0.00000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.43426  n/a   
 
 
-
 
NC_007498  Pcar_1424  integration host factor, alpha subunit  40 
 
 		 93 aa  69.3  0.00000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000184784  n/a   
 
 
-
 
NC_010506  Swoo_3110  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  69.3  0.00000000002  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000105676  hitchhiker  0.00000299463 
 
 
-
 
NC_010803  Clim_0356  histone family protein DNA-binding protein  41.67 
 
 		 102 aa  68.9  0.00000000002  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  69.3  0.00000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal  1 
 
 
-
 
NC_008639  Cpha266_0424  histone family protein DNA-binding protein  41.67 
 
 		 102 aa  69.3  0.00000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0149855  n/a   
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  37.35 
 
 		 91 aa  68.6  0.00000000003  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_008609  Ppro_2302  histone family protein DNA-binding protein  38.82 
 
 		 97 aa  68.6  0.00000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_008783  BARBAKC583_0550  DNA-binding protein HU-beta  39.76 
 
 		 92 aa  68.6  0.00000000003  Bartonella bacilliformis KC583  Bacteria  normal  0.169626  n/a   
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  37.78 
 
 		 90 aa  68.2  0.00000000003  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_009092  Shew_2505  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  68.2  0.00000000004  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000000791734  normal  0.581146 
 
 
-
 
NC_013422  Hneap_0390  histone family protein DNA-binding protein  36.14 
 
 		 90 aa  68.2  0.00000000004  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.0000165854  n/a   
 
 
-
 
NC_009483  Gura_4407  histone family protein DNA-binding protein  41.18 
 
 		 94 aa  67.8  0.00000000004  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000192025  n/a   
 
 
-
 
NC_007512  Plut_1724  histone-like DNA-binding protein  41.67 
 
 		 102 aa  68.2  0.00000000004  Chlorobium luteolum DSM 273  Bacteria  normal  0.142965  normal  0.165722 
 
 
-
 
NC_012918  GM21_0170  histone family protein DNA-binding protein  41.18 
 
 		 94 aa  68.2  0.00000000004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000201093 
 
 
-
 
NC_011146  Gbem_0188  histone family protein DNA-binding protein  41.18 
 
 		 94 aa  68.2  0.00000000004  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2678  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  68.2  0.00000000004  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.0000000000589622  n/a   
 
 
-
 
NC_011661  Dtur_1514  histone family protein DNA-binding protein  37.36 
 
 		 91 aa  68.2  0.00000000004  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0000108882  n/a   
 
 
-
 
NC_014212  Mesil_0431  histone family protein DNA-binding protein  36.67 
 
 		 96 aa  67.8  0.00000000005  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00947903  hitchhiker  0.00103246 
 
 
-
 
NC_009675  Anae109_1886  integration host factor, alpha subunit  35.29 
 
 		 99 aa  67.8  0.00000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.067674 
 
 
-
 
NC_013440  Hoch_3742  integration host factor, alpha subunit  35.56 
 
 		 100 aa  67.4  0.00000000006  Haliangium ochraceum DSM 14365  Bacteria  normal  0.266099  normal  0.554438 
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  36.67 
 
 		 90 aa  67.4  0.00000000007  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  36.67 
 
 		 90 aa  67.4  0.00000000007  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  36.67 
 
 		 90 aa  67.4  0.00000000007  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  38.82 
 
 		 91 aa  67  0.00000000008  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_010814  Glov_1888  histone family protein DNA-binding protein  36.78 
 
 		 93 aa  67  0.00000000008  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00000630839  n/a   
 
 
-
 
NC_010501  PputW619_1745  histone family protein DNA-binding protein  39.76 
 
 		 90 aa  67  0.00000000008  Pseudomonas putida W619  Bacteria  normal  0.693876  hitchhiker  0.00044049 
 
 
-
 
NC_002947  PP_2303  histone family protein DNA-binding protein  38.55 
 
 		 90 aa  66.6  0.0000000001  Pseudomonas putida KT2440  Bacteria  normal  0.0561689  hitchhiker  0.000233767 
 
 
-
 
NC_004347  SO_1797  HU family DNA-binding protein  38.82 
 
 		 90 aa  66.2  0.0000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_3466  histone family protein DNA-binding protein  38.55 
 
 		 90 aa  66.6  0.0000000001  Pseudomonas putida F1  Bacteria  normal  0.360259  hitchhiker  0.000212777 
 
 
-
 
NC_007333  Tfu_0628  histone-like DNA-binding protein  38.82 
 
 		 93 aa  66.2  0.0000000001  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_2747  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  66.2  0.0000000001  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000000276504  normal  0.581764 
 
 
-
 
NC_011899  Hore_10570  histone family protein DNA-binding protein  40.86 
 
 		 137 aa  66.6  0.0000000001  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1909  integration host factor subunit alpha  32.58 
 
 		 113 aa  66.2  0.0000000001  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  66.6  0.0000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_009665  Shew185_1596  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  66.2  0.0000000001  Shewanella baltica OS185  Bacteria  unclonable  0.00000000000169185  n/a   
 
 
-
 
NC_008321  Shewmr4_2492  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  66.2  0.0000000001  Shewanella sp. MR-4  Bacteria  unclonable  0.000000000348442  normal  0.0842071 
 
 
-
 
NC_008322  Shewmr7_2560  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  66.2  0.0000000001  Shewanella sp. MR-7  Bacteria  unclonable  0.000000135506  normal  0.0536414 
 
 
-
 
NC_011891  A2cp1_1994  integration host factor subunit alpha  32.58 
 
 		 113 aa  66.2  0.0000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.110028  n/a   
 
 
-
 
NC_009438  Sputcn32_1493  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  66.2  0.0000000001  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000000388309  n/a   
 
 
-
 
NC_009997  Sbal195_1630  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  66.2  0.0000000001  Shewanella baltica OS195  Bacteria  unclonable  0.0000000159632  normal  1 
 
 
-
 
NC_009052  Sbal_1607  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  66.2  0.0000000001  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000022491  n/a   
 
 
-
 
NC_008577  Shewana3_2658  histone family protein DNA-binding protein  38.82 
 
 		 90 aa  66.2  0.0000000001  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000180426  normal  0.730265 
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  35.29 
 
 		 92 aa  66.6  0.0000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  37.5 
 
 		 91 aa  66.6  0.0000000001  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_012917  PC1_1051  transcriptional regulator HU subunit beta  36.47 
 
 		 90 aa  65.9  0.0000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.593082  n/a   
 
 
-
 
NC_013421  Pecwa_3261  transcriptional regulator HU subunit beta  36.47 
 
 		 90 aa  65.9  0.0000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  40 
 
 		 94 aa  65.5  0.0000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_007760  Adeh_1969  integration host factor subunit alpha  32.58 
 
 		 113 aa  66.2  0.0000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.0019696  n/a   
 
 
-
 
NC_007794  Saro_0165  histone-like DNA-binding protein  35.48 
 
 		 93 aa  65.5  0.0000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_2365  integration host factor subunit alpha  29.67 
 
 		 98 aa  65.9  0.0000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_2492  histone-like DNA-binding protein  38.55 
 
 		 90 aa  65.9  0.0000000002  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00401844  n/a   
 
 
-
 
NC_009012  Cthe_2657  nucleoid protein Hbs  34.94 
 
 		 91 aa  65.9  0.0000000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000194133  n/a   
 
 
-
 
NC_008345  Sfri_2593  histone family protein DNA-binding protein  37.65 
 
 		 91 aa  65.9  0.0000000002  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.0000000173721  n/a   
 
 
-
 
NC_008528  OEOE_1010  nucleoid protein Hbs  37.5 
 
 		 91 aa  66.2  0.0000000002  Oenococcus oeni PSU-1  Bacteria  normal  0.301873  n/a   
 
 
-
 
NC_008700  Sama_1227  HU family DNA-binding protein  37.65 
 
 		 90 aa  65.5  0.0000000002  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000165625  normal  1 
 
 
-
 
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