Gene Phep_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0128 
Symbol 
ID8251213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp154327 
End bp154629 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content34% 
IMG OID644933778 
Producthistone family protein DNA-binding protein 
Protein accessionYP_003090416 
Protein GI255530044 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGG CAGATATTAT TTCAGAAATA TCAACGAAAA CAGGAATTGA AAAGGTAGAT 
GTACAAGAAA CCGTTGAGGC ATTTTTCAAG GTCATCAAAA ACAGTATGAT CGGTGGAGAA
AATGTATACG TTAGAGGTTT TGGTAGTTTT GTTGTAAAAA AGAGAGCACA AAAAACTGCA
AGAAATATTT CTAAGAACAC AGCAATCATC ATCCCTGAGC ACTTTGTTCC AAGCTTTAAA
CCAGCAAAGG TATTTGTAGA CAAAGTGAAA AACAACTCTA AAAAACTTAG CGTAGAAGCT
TAA
 
Protein sequence
MTKADIISEI STKTGIEKVD VQETVEAFFK VIKNSMIGGE NVYVRGFGSF VVKKRAQKTA 
RNISKNTAII IPEHFVPSFK PAKVFVDKVK NNSKKLSVEA