Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3466 |
Symbol | |
ID | 5191577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3870051 |
End bp | 3870323 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640587914 |
Product | histone family protein DNA-binding protein |
Protein accession | YP_001268776 |
Protein GI | 148548674 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.360259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000212777 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAACAAGT CGGAACTGAT TGACGCTATC GCCGCATCTG CAGACATCCC GAAAGCTGTA GCCGGCCGTG CGCTGGACGC AGTCATCGAA TCCGTCACCG GCGCCCTGAA GCAAGGTGAC GATGTGGTAC TGGTTGGCTT TGGTACCTTC TCGGTCAAGG AGCGCGCCGA GCGTACCGGC CGCAACCCGC AAACCGGCAA GGCAATCAAG ATCGAAGCCG CCAAGGTTCC AGGTTTCAAG GCAGGCAAAG GCCTGAAAGA CGCCGTCAAC TAA
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Protein sequence | MNKSELIDAI AASADIPKAV AGRALDAVIE SVTGALKQGD DVVLVGFGTF SVKERAERTG RNPQTGKAIK IEAAKVPGFK AGKGLKDAVN
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