| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1258 |
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| Symbol | hup-2 |
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| ID | 2553220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 1334674 |
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| End bp | 1334952 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637149933 |
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| Product | DNA-binding protein HU |
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| Protein accession | NP_905442 |
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| Protein GI | 34540963 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAAAG CTGACGTAGT GAACGCTATT GCGAAGTCGA CAGGGATTGA TAAAGAAACG
ACCCTGAAAG TCGTAGAGTC GTTCATGGAC ACTATCAAAG ACTCCCTTTC GGAAGGTGAT
AATGTATATC TCCGCGGATT TGGTAGCTTC ATTGTGAAGG AAAGAGCTGA GAAGACAGCA
CGTAATATTT CGAAGCAGAC GACTATCATC ATCCCCAAAA GGAATATTCC GGCGTTTAAG
CCTTCGAAAA TCTTTATGAG TCAGATGAAA CAAGACTAA
|
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| Protein sequence | MTKADVVNAI AKSTGIDKET TLKVVESFMD TIKDSLSEGD NVYLRGFGSF IVKERAEKTA
RNISKQTTII IPKRNIPAFK PSKIFMSQMK QD
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