30 homologs were found in PanDaTox collection
for query gene Mmwyl1_0508 on replicon NC_009654
Organism: Marinomonas sp. MWYL1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009654  Mmwyl1_0508  protocatechuate 4,5-dioxygenase subunit alpha  100 
 
 		 135 aa  284  2.9999999999999996e-76  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_2701  protocatechuate 4,5-dioxygenase subunit alpha  61.48 
 
 		 129 aa  177  2.9999999999999997e-44  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.542053 
 
 
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NC_007958  RPD_0983  protocatechuate 4,5-dioxygenase subunit alpha  61.48 
 
 		 129 aa  174  3e-43  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0570785  normal  1 
 
 
-
 
NC_007778  RPB_0873  protocatechuate 4,5-dioxygenase subunit alpha  59.84 
 
 		 129 aa  171  1.9999999999999998e-42  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.58932 
 
 
-
 
NC_011004  Rpal_5182  protocatechuate 4,5-dioxygenase subunit alpha  60.66 
 
 		 129 aa  168  3e-41  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_3636  protocatechuate 4,5-dioxygenase subunit alpha  60.33 
 
 		 146 aa  167  6e-41  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008228  Patl_3886  protocatechuate 4,5-dioxygenase subunit alpha  61.16 
 
 		 128 aa  165  2e-40  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_2028  protocatechuate 4,5-dioxygenase subunit alpha  56.15 
 
 		 150 aa  162  2.0000000000000002e-39  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.261713  normal  1 
 
 
-
 
NC_010002  Daci_3814  protocatechuate 4,5-dioxygenase subunit alpha  55.38 
 
 		 135 aa  158  2e-38  Delftia acidovorans SPH-1  Bacteria  normal  0.345259  normal  0.226916 
 
 
-
 
NC_007908  Rfer_0331  protocatechuate 4,5-dioxygenase subunit alpha  52.67 
 
 		 147 aa  155  1e-37  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_0170  protocatechuate 4,5-dioxygenase  53.44 
 
 		 443 aa  153  9e-37  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.827608  normal  1 
 
 
-
 
NC_010002  Daci_4446  protocatechuate 4,5-dioxygenase subunit alpha  54.92 
 
 		 152 aa  149  1e-35  Delftia acidovorans SPH-1  Bacteria  normal  0.256518  normal  0.163642 
 
 
-
 
NC_007794  Saro_2813  protocatechuate 4,5-dioxygenase subunit alpha  54.62 
 
 		 145 aa  144  5e-34  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.405358  n/a   
 
 
-
 
NC_008538  Arth_4373  protocatechuate 4,5-dioxygenase  52.5 
 
 		 433 aa  140  5e-33  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_010623  Bphy_3205  protocatechuate 4,5-dioxygenase, alpha subunit  47.62 
 
 		 135 aa  115  3e-25  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_2734  protocatechuate 4,5-dioxygenase subunit alpha  45.45 
 
 		 121 aa  92  2e-18  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0103639  normal  0.0458484 
 
 
-
 
NC_007908  Rfer_0295  protocatechuate 4,5-dioxygenase subunit alpha  35.71 
 
 		 117 aa  85.1  3e-16  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_38370  protocatechuate 4,5-dioxygenase alpha subunit  35.45 
 
 		 116 aa  84.7  4e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3939  protocatechuate 4,5-dioxygenase subunit alpha  37.39 
 
 		 120 aa  83.6  9e-16  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0325  extradiol ring-cleavage dioxygenase LigAB, LigA subunit  37 
 
 		 118 aa  83.6  9e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0235577  n/a   
 
 
-
 
NC_010002  Daci_0915  protocatechuate 4,5-dioxygenase subunit alpha  39.42 
 
 		 113 aa  81.6  0.000000000000003  Delftia acidovorans SPH-1  Bacteria  normal  0.0109457  normal  1 
 
 
-
 
NC_009485  BBta_2733  protocatechuate 4,5-dioxygenase subunit alpha  39.39 
 
 		 117 aa  81.6  0.000000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.453288 
 
 
-
 
NC_007794  Saro_1233  extradiol ring-cleavage dioxygenase LigAB, LigA subunit  40 
 
 		 242 aa  81.6  0.000000000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0679707  n/a   
 
 
-
 
NC_010524  Lcho_3698  protocatechuate 4,5-dioxygenase subunit alpha  39 
 
 		 120 aa  81.3  0.000000000000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009654  Mmwyl1_3921  protocatechuate 4,5-dioxygenase subunit alpha  39.6 
 
 		 115 aa  78.2  0.00000000000004  Marinomonas sp. MWYL1  Bacteria  normal  0.925791  normal  1 
 
 
-
 
NC_011004  Rpal_1198  protocatechuate 4,5-dioxygenase subunit alpha  34 
 
 		 124 aa  61.2  0.000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_1060  protocatechuate 4,5-dioxygenase subunit alpha  34 
 
 		 127 aa  59.3  0.00000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_31250  protocatechuate 4,5-dioxygenase  25.25 
 
 		 420 aa  43.1  0.001  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_4716  extradiol ring-cleavage dioxygenase LigAB, LigA subunit  31.76 
 
 		 109 aa  43.5  0.001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.992006  normal  1 
 
 
-
 
NC_009832  Spro_2096  protocatechuate 4,5-dioxygenase  25.25 
 
 		 420 aa  41.6  0.003  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.624399 
 
 
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