Gene Saro_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2813 
Symbol 
ID3916973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3037312 
End bp3037749 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID640445592 
Productprotocatechuate 4,5-dioxygenase subunit alpha 
Protein accessionYP_498083 
Protein GI87200826 
COG category 
COG ID 
TIGRFAM ID[TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.405358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGACA ACAGCTCGAC CGATAAGCCC AAGCCTGTGC AGAACATCCA CGAGTACCTC 
GCCGAGTTCG AGGACATCCC CGGCACGCGC ATCTATACCG CTGCCCGCGC CCGCAAGGGG
TACTGGATCA ACCAGTTCGC GATGAGCCTG ATGAAGCCGG AGAACCGCGA GCGGTTCAAG
GCGAACGAGC GGGCCTATCT TGACGAATGG AAGATCAGCG AGGAGGCCAA GGAAGCGCTG
CTCGCGCGGG ACTACAACCG CCTGCTCGAC CTTGGCGGCA ACGTCTATTT CCTGTCGAAG
CTGTTCTCCT CGGACGGACT GCCGTTCGCC GAGGCGGTCA GCACGATGAC CGACATGACC
TGGCCGGAAT ACCGCCAGAT GATGCTGGAC GGCGGACGCA AGCCCGAAGG CAACCGATCG
ATCAAGGGAG GCTATTGA
 
Protein sequence
MTDNSSTDKP KPVQNIHEYL AEFEDIPGTR IYTAARARKG YWINQFAMSL MKPENRERFK 
ANERAYLDEW KISEEAKEAL LARDYNRLLD LGGNVYFLSK LFSSDGLPFA EAVSTMTDMT
WPEYRQMMLD GGRKPEGNRS IKGGY