| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0983 |
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| Symbol | |
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| ID | 4021458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1111478 |
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| End bp | 1111867 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637961174 |
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| Product | protocatechuate 4,5-dioxygenase subunit alpha |
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| Protein accession | YP_568122 |
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| Protein GI | 91975463 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0570785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCTCG ACAAGCCCTA CACCGATGTG CCCGGCACGA CGATCTTCGA CGCCGACATG
TCGCGGCTCG GCTATCACCT GAACCAGTTC TGCATGTCGC TGATGAAGGC CGAGAACCGC
GCCCGCTTCA AGGCCGACGA ACGCGCCTAT CTCGACGAAT GGCCGATGAC CGAGGAGCAG
AAGCAGGCGG TGCTCGCCCG CGACCTCAAC CGCTGCATCG CGCTCGGCGG CAATATCTAC
TTCCTCGCCA AGATCGGCGC CACCGACGGC AAGAGCTTTC AGCAGATGGC GGGCTCGATG
ACCGGCATGA CCGAAGAGGA ATATCGCAAC ATGATGGTCG GCGGCGGCCG CTCGGTCGAA
GGCAATCGCT ATATCGGGGA GAAGAAGTAA
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| Protein sequence | MPLDKPYTDV PGTTIFDADM SRLGYHLNQF CMSLMKAENR ARFKADERAY LDEWPMTEEQ
KQAVLARDLN RCIALGGNIY FLAKIGATDG KSFQQMAGSM TGMTEEEYRN MMVGGGRSVE
GNRYIGEKK
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