Gene Mmwyl1_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_3939 
Symbol 
ID5367629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp4445019 
End bp4445381 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content41% 
IMG OID640806327 
Productprotocatechuate 4,5-dioxygenase subunit alpha 
Protein accessionYP_001342771 
Protein GI152997936 
COG category 
COG ID 
TIGRFAM ID[TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGTA ACTATACAGA TCGAAAGCTC CAAGGCACGT ACCTTTTTGA TGGTCAAATG 
GCCAAAAAAG GCTACGGTTT AAATAAAATG TGTTACTCGT TTAATGACCA AACTGCACGT
GATGAATTTA ATGCGGACCC AGAAGCGTAC TGTGAAAAAT TCAAACTCAC AGAGGCGCAA
AAAGAAGCTA TTCGTAATAG AGATGTAATC GGACTTCTGC GTGAAGGCGG TAGTATCTAT
TACTTGGCAA AATTTACCGG CTTACTAAAG CTAAATATGC AAGACATTGG TGGCCTGCAA
ACTGGCATGA GCACCGATGA ATTTAAAGCA ATGCTTGAGA AAAATGGGCG AGGAGAAGTC
TAA
 
Protein sequence
MASNYTDRKL QGTYLFDGQM AKKGYGLNKM CYSFNDQTAR DEFNADPEAY CEKFKLTEAQ 
KEAIRNRDVI GLLREGGSIY YLAKFTGLLK LNMQDIGGLQ TGMSTDEFKA MLEKNGRGEV