| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5182 |
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| Symbol | |
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| ID | 6412882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5586616 |
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| End bp | 5587005 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642715072 |
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| Product | protocatechuate 4,5-dioxygenase subunit alpha |
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| Protein accession | YP_001994145 |
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| Protein GI | 192293540 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCCTCG ACAAACCCTA CAAGGACGTG CCCGGCACCA CGATCTTCGA CGCCGACATG
TCGCGCCAGG GCTATCATCT CAACCAGTTC TGCATGTCGC TGATGAAGGC CGAGAACCGC
GCCCGCTTCA AGGCGGACGA GCGCGCTTAT CTCGACGAGT GGCCGATGAC CGAGGAGCAG
AAGCAGGCGG TGCTCGATCG CGATCTCAAT CGCTGCATCG CGCTCGGCGG CAACATCTAC
TTCCTGGCGA AGATCGGCGC CACCGACGGC AAGAGCTTCC AGCAGATGGC GGGCTCGATG
ACCGGGATGA CCGAAGAGGA ATACCGCAAC ATGATGGTCG GCGGCGGCCG CCCGATCGAG
GGCAATCGCT ACGTCGGGGA GAAGAAGTAA
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| Protein sequence | MPLDKPYKDV PGTTIFDADM SRQGYHLNQF CMSLMKAENR ARFKADERAY LDEWPMTEEQ
KQAVLDRDLN RCIALGGNIY FLAKIGATDG KSFQQMAGSM TGMTEEEYRN MMVGGGRPIE
GNRYVGEKK
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