12 homologs were found in PanDaTox collection
for query gene Sros_4716 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013595  Sros_4716  extradiol ring-cleavage dioxygenase LigAB, LigA subunit  100 
 
 		 109 aa  220  4.9999999999999996e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.992006  normal  1 
 
 
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NC_007778  RPB_0873  protocatechuate 4,5-dioxygenase subunit alpha  38.78 
 
 		 129 aa  43.9  0.0008  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.58932 
 
 
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NC_007958  RPD_0983  protocatechuate 4,5-dioxygenase subunit alpha  38.78 
 
 		 129 aa  43.9  0.0008  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0570785  normal  1 
 
 
-
 
NC_007963  Csal_0325  extradiol ring-cleavage dioxygenase LigAB, LigA subunit  31.25 
 
 		 118 aa  43.9  0.0008  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0235577  n/a   
 
 
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NC_009485  BBta_2701  protocatechuate 4,5-dioxygenase subunit alpha  35 
 
 		 129 aa  43.5  0.0009  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.542053 
 
 
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NC_009654  Mmwyl1_0508  protocatechuate 4,5-dioxygenase subunit alpha  31.76 
 
 		 135 aa  43.5  0.001  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_5182  protocatechuate 4,5-dioxygenase subunit alpha  38.78 
 
 		 129 aa  43.5  0.001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_2813  protocatechuate 4,5-dioxygenase subunit alpha  43.75 
 
 		 145 aa  42.4  0.002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.405358  n/a   
 
 
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NC_010524  Lcho_3636  protocatechuate 4,5-dioxygenase subunit alpha  33.72 
 
 		 146 aa  41.6  0.004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010002  Daci_0104  extradiol ring-cleavage dioxygenase LigAB LigA subunit  46.15 
 
 		 108 aa  40.8  0.006  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
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NC_010002  Daci_3814  protocatechuate 4,5-dioxygenase subunit alpha  34.09 
 
 		 135 aa  40.4  0.008  Delftia acidovorans SPH-1  Bacteria  normal  0.345259  normal  0.226916 
 
 
-
 
NC_008781  Pnap_2028  protocatechuate 4,5-dioxygenase subunit alpha  36.73 
 
 		 150 aa  40  0.01  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.261713  normal  1 
 
 
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