| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2701 |
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| Symbol | ligA |
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| ID | 5150139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2793456 |
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| End bp | 2793845 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640557593 |
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| Product | protocatechuate 4,5-dioxygenase subunit alpha |
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| Protein accession | YP_001238747 |
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| Protein GI | 148254162 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.542053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCTCG ACAAACCCTA TACCGACGTT CCCGGCACGA CCATCTTCGA CGCGGACATG
TCGCGGATGG GCTATCACCT CAACCAGTTC TGCATGTCAC TGATGAAGGC GGAGAACCGC
GCCCGCTTCA AGGCCAATGA GCGCGCCTAT CTCGACGAAT GGCCGATGAG CGAGGAGCAG
AAGCAGGCGG TGCTCGATCG TGACCTGAAC CGCTGCATTG CGCTTGGCGG CAACATCTAC
TTCCTCGCCA AGATCGGTGC GACCGATGGC AAGAGCTTTC AGCAGATGGC CGGCAGCATG
ACCGGCATGA CCGAAGAACA ATACCGCGAC ATGATGGTGA AGGGCGGCCG CTCGCCTGAG
GGCAACCGCT ACACCGGGGA GAAGAAGTAA
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| Protein sequence | MSLDKPYTDV PGTTIFDADM SRMGYHLNQF CMSLMKAENR ARFKANERAY LDEWPMSEEQ
KQAVLDRDLN RCIALGGNIY FLAKIGATDG KSFQQMAGSM TGMTEEQYRD MMVKGGRSPE
GNRYTGEKK
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