| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4716 |
|---|
| Symbol | |
|---|
| ID | 8668010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5240939 |
|---|
| End bp | 5241268 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | extradiol ring-cleavage dioxygenase LigAB, LigA subunit |
|---|
| Protein accession | YP_003340304 |
|---|
| Protein GI | 271966108 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.992006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGG AGCACTTCCG GCCGCAACTG CGGACCAACG ATCTCGTGCA AGACCTGAAG
TGGAATGACG AGCTGCGAAC CCGCTTCGAG GAATCCGAGG CGACGGTGCT GGCCGAGTAC
CCGCTCACCG AGGAGGAGCG GGAGGCGATC CGCACCCGTG ACTTCCGCCG GCTGTACGAG
TTGGGGCTGC ACCCGTACCT GCTCAGCCAG CTCGCCCGTC TGCTGTTCGG CACCGGTGAG
AAGGCCGGCA CGTCCGCGCC GGCGATGGCG CTCATCCGAT CACTACTCGG AGACGAGTAC
GAGCAGTACA TGGGGAACCG GAGTGGTTGA
|
|---|
| Protein sequence | MALEHFRPQL RTNDLVQDLK WNDELRTRFE ESEATVLAEY PLTEEEREAI RTRDFRRLYE
LGLHPYLLSQ LARLLFGTGE KAGTSAPAMA LIRSLLGDEY EQYMGNRSG
|
|---|
| |