| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0873 |
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| Symbol | |
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| ID | 3909053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1000578 |
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| End bp | 1000967 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637882766 |
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| Product | protocatechuate 4,5-dioxygenase subunit alpha |
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| Protein accession | YP_484495 |
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| Protein GI | 86747999 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.58932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCTCG ACAAACCCTA TACCGACGTG CCCGGCACCA CGATCTTCGA CGCCGATATG
TCGCGGATGG GCTATCACCT GAACCAGTTC TGCATGTCGC TGATGAAGGC GGAGAACCGC
GCCCGCTTCA AGGCGGACGA ACGCGCCTAT CTCGACGAAT GGCCGATGAC CGAGGAGCAG
AAGCAGGCGG TGCTCGATCG CGATCTCAAC CGCTGCATTT CGCTCGGCGG CAACATCTAC
TTCCTCGCCA AGATCGGCGC GACCGACGGC AAGAGCTTCC AGCAGATGGC GGGCTCGATG
ACCGGCATGA CCGAAGAGGA ATATCGCAAC ATGATGATCA ATGGCGGCCG TTCCGCCGAG
GGCAACCGCT ACATCGGGGA GAAGAAGTAA
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| Protein sequence | MSLDKPYTDV PGTTIFDADM SRMGYHLNQF CMSLMKAENR ARFKADERAY LDEWPMTEEQ
KQAVLDRDLN RCISLGGNIY FLAKIGATDG KSFQQMAGSM TGMTEEEYRN MMINGGRSAE
GNRYIGEKK
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