| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0170 |
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| Symbol | pcmA |
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| ID | 4692682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 191965 |
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| End bp | 193296 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639847955 |
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| Product | protocatechuate 4,5-dioxygenase |
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| Protein accession | YP_994980 |
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| Protein GI | 121607173 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.827608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTGG ACAAACCCTA TCTGGACGTG CCCGGCACGA TCATTTTTGA CGCCGAGCAA
AGCCGCAAAG GCTACTGGCT CAACCAGTTC TGCATGAGCC TGATGCAGGC CGACAACCGC
GCACGCTTCA AGGCCGACGA GCGCGCCTAC CTCGACCGCT GGGCGCTGAC CGAAGCGCAA
AAACAGGCCG TGCTCGCGCG CGACCTGAAC CAATGCCTGC GCCTGGGCGG CAACATCTAC
TTCCTGGCCA AAATCGGCGC CACCGACGGC AAGAGCTTCC AGCAAATGGC CGGCAGCATG
ACCGGCCTGA GCGAAGAGCA ATACCGCGAC ATGATGATCA GTGGCGGGCG CCCGGCCAAC
GGCCTGCGCG TGCCCGGAGA AAACGGCGCA ACCCGGACGC AGCCCGCGCC GCCGGCGCAG
CCAACCGGCG CGCGCCCGGC CAAGGCCCGG ATCAGCGCTG CGGTCTTCAG CTCCCATGTC
CCGGCCATCG GCGCCGCCAT CGACCAGGGC AAGACACAGC AAGACTACTG GAAGCCGCTG
TTTGCCGGCT ACGACTTGTC CCGGCAATGG CTCAGGGAGC ACCGGCCCGA CGTGATCTTG
CTGGTCTACA ACGACCACGC CACGGCATTC AGCCTGGAGA TGATCCCGAC CTTTGCCATC
GGCACGGCCG CCCAATTCCA GCCGGCCGAC GAAGGCTGGG GCCCGCGCCC CGTGCCCCCG
GTCATCGGCC ACCCGGAACT GGCCGCGCAC ATCGCGCAAT CGGTGATACA GCAAGACTTC
GACCTGACCA TCGTCAACAA AATGGACGTG GACCACGGCC TGACGGTGCC GCTGTCGCTG
ATGTGCGGCC AGCCCCTGGC CTGGCCCTGC CCGGTCATCC CCTTCGCGGT CAATGTGGTG
CAATACCCCG TGCCCAGCGG CCGCCGCTGC TACCAGCTCG GCCAGGCCAT CCGCCGGGCC
ATCGAAAGCT ACGACGCAGA CCTGAACGTG CAAATCTGGG GCACGGGCGG CATGAGCCAC
CAGTTGCAAG GCCCCCGGGC CGGGTTGATC AACAAAGAAT TCGACAACGC CTTCCTGGAC
CAACTCATCA CGGACCCCGA AGCCGCAGCC AGCATCCCCC ATATCGACTA CGTGCGCGAG
GCGGGCAGCG AAGGCATCGA GTTGGTGATG TGGCTCATCG CGCGCGGCGC GATGTCGGAT
GTGGCGCGCG GTGCGACGCC GGATGCGGCG GCCGATGGCG CCACCGGCAG GCCCCCGAAG
GTCGTGCACC GCTTCTACCA TGTGCCCGCA TCCAACACGG CCGTCGGCCA CCTGATTTTG
GAGAACCCAT GA
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| Protein sequence | MSLDKPYLDV PGTIIFDAEQ SRKGYWLNQF CMSLMQADNR ARFKADERAY LDRWALTEAQ
KQAVLARDLN QCLRLGGNIY FLAKIGATDG KSFQQMAGSM TGLSEEQYRD MMISGGRPAN
GLRVPGENGA TRTQPAPPAQ PTGARPAKAR ISAAVFSSHV PAIGAAIDQG KTQQDYWKPL
FAGYDLSRQW LREHRPDVIL LVYNDHATAF SLEMIPTFAI GTAAQFQPAD EGWGPRPVPP
VIGHPELAAH IAQSVIQQDF DLTIVNKMDV DHGLTVPLSL MCGQPLAWPC PVIPFAVNVV
QYPVPSGRRC YQLGQAIRRA IESYDADLNV QIWGTGGMSH QLQGPRAGLI NKEFDNAFLD
QLITDPEAAA SIPHIDYVRE AGSEGIELVM WLIARGAMSD VARGATPDAA ADGATGRPPK
VVHRFYHVPA SNTAVGHLIL ENP
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