Gene Daci_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0915 
Symbol 
ID5746469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1027019 
End bp1027360 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content65% 
IMG OID641295995 
Productprotocatechuate 4,5-dioxygenase subunit alpha 
Protein accessionYP_001561946 
Protein GI160896364 
COG category 
COG ID 
TIGRFAM ID[TIGR02792] protocatechuate 4,5-dioxygenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0109457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC AGCCGCAGAT TCCCGGCACC ACCCTGTTCG ATGGCAGGCA GGCCCGCAAG 
GGCTATGCGC TCAACAGCAT GTGCTTTTCC TTCAACGAGC TGGCCAACCG CCAGGCCTTC
CTGGCCGACG AGGAGGCCTA TATGCGCAGC TACGGGCTGA ACCAGGAGCA GGCCGATGCC
GTGCGCGCCC GCAACGTGCT GCAGATGATC GCGGCCGGCG GCAACGCCTA CTACCTGGCC
AAGCTGGCCG GCATCTTTCA CCTGGACATG CAGGACATAG GCGCCCAGCA GACCGGCATG
ACCAAGGCCG AATTCCAGGC CCTGCTGCGC TCGCACGCCT GA
 
Protein sequence
MADQPQIPGT TLFDGRQARK GYALNSMCFS FNELANRQAF LADEEAYMRS YGLNQEQADA 
VRARNVLQMI AAGGNAYYLA KLAGIFHLDM QDIGAQQTGM TKAEFQALLR SHA