| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2096 |
|---|
| Symbol | |
|---|
| ID | 5606473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2290413 |
|---|
| End bp | 2291675 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640937634 |
|---|
| Product | protocatechuate 4,5-dioxygenase |
|---|
| Protein accession | YP_001478327 |
|---|
| Protein GI | 157370338 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.624399 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGA TCATTGGCGG ATTGGCGGTG TCACACACCC CAACCATCGG TTTTGCAGTG
GATCACAACA AGCAGAACGA AACGGCCTGG GCGCCCATTT TTGACGGTTT CGCCCCGATG
CAGCAATGGC TGGAAGAGAA AAAGCCGGAC GTGTTGCTGT ATGTCTTCAA CGACCACGTG
ACCTCGTTTT TCTTCGATCA CTATTCGGCA TTCGTGCTCG GCATTGACGA CAGCTACGCG
GTGGCGGACG AAGGTGGCGG CCCGCGTGAT TTGCCGCCGA TTCGCGGCCA TGCGGCGCTG
TCACAGCACA TCGGTGCCAG CCTGATGGCC GACGAGTTTG ATATGTCGTT CTTCCAGGAT
AAGCCGCTCG ATCACGGGCT GTTCTCTCCG CTCTCCGCCC TGCTGCCGTG GCAGAATGGC
TGGCCGATGC AGGTGGTGCC GCTGCAGGTC GGGGTGCTGC AGTTCCCGAT CCCTTCGGCT
CGCCGCTGCT ACAAGCTCGG TCAGGCGCTG CGCCGGGCAA TTGAAAGCTT CCCGGAAGAC
TTGCGCGTCG CGGTGGTGGC CACCGGCGGC GTCTCGCATC AGGTGCATGG CGAACGTTGC
GGTTTTAATA ATCCGCAGTG GGATGAGCAG TTTGTCGACC TGCTGGTCAA TGACCCGGAG
CGCCTGACCG AAATCACGCT GGCGGAGTAC GCCACCTTGG GTGGGCTGGA GGGCGCGGAG
GTGATCATGT GGCTGATTAT GCGCGGCGCC CTGTCGGCCA ACGTCGAAAA ACTGCATCAG
GCCTATTACC TGCCGTCCAT GACCGGTATC GCCACGCTGA TCCTGGAAAA CCAGGCGCGC
GAGGCACCGG TAGATGTCCA TCAGCGCCAG CGCGACAAAA TCAACCTGCA ACTGGCGGGG
GTTGAGAAAC TGCCGGGCAC CTATCCCTTT ACCCATGCGC GCAGCCTGAA AGCCATCCGC
ATCAACCGTT TCCTGCACAA ACTGATCCAG CCGGCCTGGC GCGAACGCTT CAATAACGCC
CAGCAGGCGC TGTTCGACGA AGCGCAGCTC ACCACTGAGG AACAGCAGCT GCTGCGCGAG
CTGGACTGGC GCGGGCTGAT CCATTACGGC GTCAGTTTCT TCCTGTTGGA AAAGCTCGGG
GCAGTGGTCG GGGTATCCAA CCTGCATATC TACTCGGCGA TGCGTGGCCA GACGCTGGAT
GAGTTCCAGC AAACCCGCAA TCAGCAAGTG TTGTATTCCG TTGCGGGGAA AGCGCCAAAA
TGA
|
|---|
| Protein sequence | MAKIIGGLAV SHTPTIGFAV DHNKQNETAW APIFDGFAPM QQWLEEKKPD VLLYVFNDHV
TSFFFDHYSA FVLGIDDSYA VADEGGGPRD LPPIRGHAAL SQHIGASLMA DEFDMSFFQD
KPLDHGLFSP LSALLPWQNG WPMQVVPLQV GVLQFPIPSA RRCYKLGQAL RRAIESFPED
LRVAVVATGG VSHQVHGERC GFNNPQWDEQ FVDLLVNDPE RLTEITLAEY ATLGGLEGAE
VIMWLIMRGA LSANVEKLHQ AYYLPSMTGI ATLILENQAR EAPVDVHQRQ RDKINLQLAG
VEKLPGTYPF THARSLKAIR INRFLHKLIQ PAWRERFNNA QQALFDEAQL TTEEQQLLRE
LDWRGLIHYG VSFFLLEKLG AVVGVSNLHI YSAMRGQTLD EFQQTRNQQV LYSVAGKAPK
|
|---|
| |