More than 300 homologs were found in PanDaTox collection
for query gene Lferr_0839 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011761  AFE_0690  formate dehydrogenase family accessory protein FdhD  100 
 
 
285 aa  584  1e-166  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0839  formate dehydrogenase family accessory protein FdhD  100 
 
 
285 aa  584  1e-166  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.734645  normal 
 
 
-
 
NC_011761  AFE_1654  formate dehydrogenase family accessory protein FdhD  51.82 
 
 
282 aa  281  8.000000000000001e-75  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1352  formate dehydrogenase family accessory protein FdhD  51.82 
 
 
282 aa  281  8.000000000000001e-75  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3819  formate dehydrogenase accessory protein  36.92 
 
 
269 aa  162  9e-39  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.934196  n/a   
 
 
-
 
NC_013730  Slin_3157  formate dehydrogenase family accessory protein FdhD  38.3 
 
 
281 aa  160  3e-38  Spirosoma linguale DSM 74  Bacteria  normal  0.630603  normal 
 
 
-
 
NC_007973  Rmet_0556  formate dehydrogenase accessory protein  38.43 
 
 
281 aa  157  2e-37  Cupriavidus metallidurans CH34  Bacteria  normal  0.152789  normal  0.415785 
 
 
-
 
NC_012791  Vapar_3020  formate dehydrogenase family accessory protein FdhD  39.17 
 
 
278 aa  157  2e-37  Variovorax paradoxus S110  Bacteria  normal  0.848082  n/a   
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  37.55 
 
 
273 aa  157  3e-37  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_008786  Veis_2382  formate dehydrogenase family accessory protein FdhD  35.6 
 
 
277 aa  153  2.9999999999999998e-36  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0620  formate dehydrogenase accessory protein  34.94 
 
 
288 aa  152  5.9999999999999996e-36  Ralstonia eutropha JMP134  Bacteria  normal  0.979772  n/a   
 
 
-
 
NC_007947  Mfla_0719  formate dehydrogenase family accessory protein FdhD  34.4 
 
 
278 aa  151  1e-35  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0200  formate dehydrogenase family accessory protein FdhD  34.92 
 
 
272 aa  145  9e-34  Thauera sp. MZ1T  Bacteria  normal  0.754057  n/a   
 
 
-
 
NC_008010  Dgeo_2744  formate dehydrogenase family accessory protein FdhD  40.09 
 
 
251 aa  142  6e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3588  formate dehydrogenase family accessory protein FdhD  41.39 
 
 
291 aa  141  9.999999999999999e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3264  formate dehydrogenase family accessory protein FdhD  41.39 
 
 
291 aa  141  9.999999999999999e-33  Methylobacterium extorquens PA1  Bacteria  normal  0.859238  normal  0.14649 
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  35.89 
 
 
284 aa  141  9.999999999999999e-33  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0254  formate dehydrogenase family accessory protein FdhD  41.25 
 
 
299 aa  140  1.9999999999999998e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0343903  n/a   
 
 
-
 
NC_007925  RPC_4644  formate dehydrogenase accessory protein  33.72 
 
 
272 aa  140  1.9999999999999998e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4278  formate dehydrogenase family accessory protein FdhD  38.96 
 
 
271 aa  140  3e-32  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3478  formate dehydrogenase family accessory protein FdhD  33.97 
 
 
292 aa  140  3e-32  Xanthobacter autotrophicus Py2  Bacteria  normal  0.739751  normal  0.474196 
 
 
-
 
NC_012857  Rpic12D_4388  formate dehydrogenase family accessory protein FdhD  38.96 
 
 
271 aa  140  3e-32  Ralstonia pickettii 12D  Bacteria  normal  0.915911  normal  0.955368 
 
 
-
 
NC_010524  Lcho_2747  formate dehydrogenase family accessory protein FdhD  36.84 
 
 
292 aa  140  3e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0059323 
 
 
-
 
NC_011071  Smal_2149  formate dehydrogenase family accessory protein FdhD  35.8 
 
 
282 aa  140  3e-32  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2059  formate dehydrogenase accessory protein FdhD  34.38 
 
 
277 aa  139  3.9999999999999997e-32  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0073  formate dehydrogenase accessory protein  36.33 
 
 
277 aa  139  4.999999999999999e-32  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0838  formate dehydrogenase family accessory protein FdhD  35.06 
 
 
275 aa  137  2e-31  Acidiphilium cryptum JF-5  Bacteria  normal  0.0377992  n/a   
 
 
-
 
NC_010725  Mpop_3460  formate dehydrogenase family accessory protein FdhD  39.75 
 
 
291 aa  137  2e-31  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4159  formate dehydrogenase accessory protein  35.39 
 
 
277 aa  137  2e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1325  formate dehydrogenase  38.7 
 
 
282 aa  136  4e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.201918 
 
 
-
 
NC_013421  Pecwa_4441  formate dehydrogenase accessory protein  35.39 
 
 
277 aa  136  4e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0300  formate dehydrogenase family accessory protein FdhD  35.5 
 
 
268 aa  136  4e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1390  formate dehydrogenase accessory protein FdhD  34.68 
 
 
306 aa  135  5e-31  Methylococcus capsulatus str. Bath  Bacteria  normal  0.780868  n/a   
 
 
-
 
NC_009901  Spea_0444  formate dehydrogenase accessory protein  37.3 
 
 
287 aa  136  5e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  33.96 
 
 
283 aa  136  5e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_011989  Avi_4096  formate dehydrogenase family accessory protein FdhD  35.54 
 
 
274 aa  135  7.000000000000001e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp1050  formate dehydrogenase associated protein  38.43 
 
 
273 aa  135  9e-31  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2557  formate dehydrogenase accessory protein  37.89 
 
 
269 aa  135  9e-31  Jannaschia sp. CCS1  Bacteria  normal  0.266553  normal 
 
 
-
 
NC_012912  Dd1591_0057  formate dehydrogenase accessory protein  34.54 
 
 
272 aa  134  9.999999999999999e-31  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0622  formate dehydrogenase accessory protein  35.29 
 
 
275 aa  134  1.9999999999999998e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2355  formate dehydrogenase family accessory protein FdhD  40 
 
 
283 aa  134  1.9999999999999998e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0108  formate dehydrogenase accessory protein  33.61 
 
 
278 aa  134  1.9999999999999998e-30  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0108  formate dehydrogenase accessory protein  33.61 
 
 
278 aa  134  1.9999999999999998e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  34.85 
 
 
297 aa  133  3e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_009485  BBta_3088  formate dehydrogenase accessory protein  34.9 
 
 
278 aa  133  3e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0082  formate dehydrogenase accessory protein  33.88 
 
 
278 aa  133  3e-30  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4953  formate dehydrogenase family accessory protein FdhD  34.92 
 
 
276 aa  133  3.9999999999999996e-30  Pseudomonas putida W619  Bacteria  normal  0.211752  hitchhiker  0.000061887 
 
 
-
 
NC_013169  Ksed_15020  formate dehydrogenase family accessory protein FdhD  32.85 
 
 
281 aa  132  6.999999999999999e-30  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.503102  normal 
 
 
-
 
NC_008322  Shewmr7_0103  formate dehydrogenase accessory protein  33.2 
 
 
278 aa  132  7.999999999999999e-30  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0282  formate dehydrogenase family accessory protein FdhD  35.39 
 
 
276 aa  131  1.0000000000000001e-29  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1873  formate dehydrogenase family accessory protein FdhD  37 
 
 
286 aa  131  1.0000000000000001e-29  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4025  formate dehydrogenase accessory protein FdhD  33.06 
 
 
283 aa  130  2.0000000000000002e-29  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0107  formate dehydrogenase accessory protein  33.2 
 
 
278 aa  130  2.0000000000000002e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_1624  formate dehydrogenase accessory protein  37.15 
 
 
275 aa  130  2.0000000000000002e-29  Thermobifida fusca YX  Bacteria  normal  0.199677  n/a   
 
 
-
 
NC_007794  Saro_0737  formate dehydrogenase family accessory protein FdhD  37.55 
 
 
264 aa  130  2.0000000000000002e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0188  formate dehydrogenase family accessory protein FdhD  37.01 
 
 
267 aa  130  2.0000000000000002e-29  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0877  formate dehydrogenase family accessory protein FdhD  36.58 
 
 
288 aa  131  2.0000000000000002e-29  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5379  formate dehydrogenase family accessory protein FdhD  37.25 
 
 
248 aa  131  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.0597745  normal 
 
 
-
 
NC_007925  RPC_4562  formate dehydrogenase family accessory protein FdhD  37.21 
 
 
277 aa  129  8.000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0257  formate dehydrogenase family accessory protein FdhD  35.39 
 
 
276 aa  128  9.000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0174674 
 
 
-
 
NC_011004  Rpal_0806  formate dehydrogenase accessory protein  33.33 
 
 
276 aa  128  9.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  36.73 
 
 
284 aa  128  9.000000000000001e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4385  formate dehydrogenase family accessory protein FdhD  37.82 
 
 
288 aa  128  1.0000000000000001e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0110  formate dehydrogenase accessory protein  33.47 
 
 
278 aa  128  1.0000000000000001e-28  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1855  formate dehydrogenase family accessory protein FdhD  35.74 
 
 
275 aa  128  1.0000000000000001e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  0.121584  normal  0.0332237 
 
 
-
 
NC_007492  Pfl01_0280  formate dehydrogenase, subunit FdhD  34.69 
 
 
279 aa  128  1.0000000000000001e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.345753  normal  0.175178 
 
 
-
 
NC_007778  RPB_0723  formate dehydrogenase accessory protein  33.7 
 
 
277 aa  127  1.0000000000000001e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0111  formate dehydrogenase accessory protein  33.47 
 
 
278 aa  128  1.0000000000000001e-28  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_0873  formate dehydrogenase family accessory protein FdhD  36.12 
 
 
288 aa  128  1.0000000000000001e-28  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0106  formate dehydrogenase accessory protein  33.47 
 
 
278 aa  128  1.0000000000000001e-28  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5406  formate dehydrogenase accessory protein FdhD  34.41 
 
 
278 aa  127  2.0000000000000002e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4945  formate dehydrogenase, subunit FdhD  33.75 
 
 
278 aa  127  2.0000000000000002e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3657  formate dehydrogenase family accessory protein FdhD  36.25 
 
 
285 aa  127  2.0000000000000002e-28  Methylocella silvestris BL2  Bacteria  n/a    normal  0.299486 
 
 
-
 
NC_009512  Pput_0272  formate dehydrogenase family accessory protein FdhD  34.98 
 
 
276 aa  127  2.0000000000000002e-28  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  33.98 
 
 
278 aa  126  3e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  38.34 
 
 
289 aa  126  3e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0036  formate dehydrogenase accessory protein  32.93 
 
 
274 aa  126  4.0000000000000003e-28  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  34.69 
 
 
299 aa  126  4.0000000000000003e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010159  YpAngola_A3771  formate dehydrogenase accessory protein  32.52 
 
 
274 aa  126  5e-28  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  34.69 
 
 
299 aa  126  5e-28  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3635  formate dehydrogenase accessory protein  36.44 
 
 
274 aa  125  6e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.222739 
 
 
-
 
NC_010084  Bmul_0582  formate dehydrogenase family accessory protein FdhD  34.83 
 
 
274 aa  125  8.000000000000001e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_4089  formate dehydrogenase family accessory protein FdhD  33.08 
 
 
277 aa  125  9e-28  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4374  formate dehydrogenase accessory protein  32.43 
 
 
266 aa  125  9e-28  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4123  formate dehydrogenase accessory protein  32.43 
 
 
266 aa  125  9e-28  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4425  formate dehydrogenase accessory protein  32.43 
 
 
266 aa  125  9e-28  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5346  formate dehydrogenase accessory protein  33.08 
 
 
277 aa  125  9e-28  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_4122  formate dehydrogenase accessory protein  33.08 
 
 
277 aa  125  9e-28  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
CP001800  Ssol_0639  formate dehydrogenase family accessory protein FdhD  33.33 
 
 
255 aa  125  1e-27  Sulfolobus solfataricus 98/2  Archaea  normal  0.444789  n/a   
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  34.57 
 
 
294 aa  125  1e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009708  YpsIP31758_4120  formate dehydrogenase accessory protein  32.52 
 
 
274 aa  125  1e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1858  formate dehydrogenase family accessory protein FdhD  35.27 
 
 
285 aa  125  1e-27  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_4282  formate dehydrogenase accessory protein  32.44 
 
 
267 aa  125  1e-27  Escherichia coli SMS-3-5  Bacteria  normal  0.715148  normal 
 
 
-
 
NC_013946  Mrub_1914  formate dehydrogenase family accessory protein FdhD  36.67 
 
 
285 aa  124  2e-27  Meiothermus ruber DSM 1279  Bacteria  normal  0.84446  hitchhiker  0.0000450272 
 
 
-
 
NC_013131  Caci_0829  formate dehydrogenase family accessory protein FdhD  31.91 
 
 
296 aa  124  2e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.00158751 
 
 
-
 
NC_011831  Cagg_1335  formate dehydrogenase family accessory protein FdhD  35.16 
 
 
289 aa  124  2e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000543766 
 
 
-
 
NC_010505  Mrad2831_0034  formate dehydrogenase family accessory protein FdhD  33.06 
 
 
280 aa  123  3e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.663186 
 
 
-
 
NC_009511  Swit_1471  formate dehydrogenase family accessory protein FdhD  34.14 
 
 
261 aa  123  3e-27  Sphingomonas wittichii RW1  Bacteria  normal  0.0194722  normal 
 
 
-
 
NC_008345  Sfri_0748  formate dehydrogenase family accessory protein FdhD  34.27 
 
 
271 aa  123  4e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0919  formate dehydrogenase family accessory protein FdhD  34.85 
 
 
292 aa  122  5e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
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