| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4562 |
|---|
| Symbol | |
|---|
| ID | 3971784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5092830 |
|---|
| End bp | 5093663 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637927673 |
|---|
| Product | formate dehydrogenase family accessory protein FdhD |
|---|
| Protein accession | YP_534403 |
|---|
| Protein GI | 90426033 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGACA ATTCGGGATT GGAACTGCTG CCGGCGTCGG TGCGCACGTC GTGTGAAATC
GCGGTGCAGC CGCTCGGTCG CGGCAAGTCA ACGGCGATGG TCGCCGAGGA GGTGCCGATC
GGCGTGTTGT ACAGCGGCAT CCCGCACGCG GTGATGATGG CGTCGCCGGC CGATCTCGAG
GATTTCGCGA TCGGCTTTTC GGTGACCGAG GGCATCATCA AGGCGGCATC CGACGTTCGC
GAGATCTCCG TGCAGCAAAC CTGCGACGGC GTCGAAATCA ATCTGGTGCT GGTGCCGGAG
CGGTTTCAGG ACTTTCTCTC GCGGCGTCGC ACGCGCAATC TGCGCGGCCA CACCAGTTGC
GGTCTGTGCG GCGTCGAGGA AGTTGCCGAC ACCCGCGCCG ACACGCCGCA GGCGCCCGCC
GGGCAGCCGT TTTCGCAGGC CGCCGTGCGC CGCGCGTTGG CTGCGCTGAC GAACCACCAA
GAGTTGCATC GGCTGACCCG CGCCGCGCAC GCCGCGGCAT GGGTTGCAAT CGAAGGCGAC
ATCCTGCTGG TGCGCGAAGA CGTCGGCCGG CATAACGCGC TTGATAAGTT GATCGGCGCG
GCAATGCGTC AGGGCTTCGA TCTCGGCGCC GGCTTCTGCC TGATCACCAG CCGCTGTTCA
TACGAGATGG TGCAGAAAGC GTTGATGGCG TCGATGCCTG CAATTGTCGC TATTTCCGCA
CCGACCGGGC TCGCTGTGCG AACGGCAGCG GCCGCCGGAC TGACGCTCGT CGCGCTGGCG
CGAGACGAGG GACAGAACGT CTATGCAGGC GCGCACAGGA TCGACGGCCC GTAG
|
|---|
| Protein sequence | MLDNSGLELL PASVRTSCEI AVQPLGRGKS TAMVAEEVPI GVLYSGIPHA VMMASPADLE
DFAIGFSVTE GIIKAASDVR EISVQQTCDG VEINLVLVPE RFQDFLSRRR TRNLRGHTSC
GLCGVEEVAD TRADTPQAPA GQPFSQAAVR RALAALTNHQ ELHRLTRAAH AAAWVAIEGD
ILLVREDVGR HNALDKLIGA AMRQGFDLGA GFCLITSRCS YEMVQKALMA SMPAIVAISA
PTGLAVRTAA AAGLTLVALA RDEGQNVYAG AHRIDGP
|
|---|
| |