| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0282 |
|---|
| Symbol | |
|---|
| ID | 5867979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 330747 |
|---|
| End bp | 331577 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641545362 |
|---|
| Product | formate dehydrogenase family accessory protein FdhD |
|---|
| Protein accession | YP_001666531 |
|---|
| Protein GI | 167031300 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCA AACCTCCGGT CTGCGCGGCC TCATCGCCCT TGTCCATGCC CGCCGCCAGC
AACAGATACG ATTACGTCCA GCTCAGCGAC GCCAAACGCG ACAGCACCCC GCTGGCCGAG
GAAGTGGCCC TGGCCATCGT CTATAACGGC CTCAACCAGG CGGTGATGCT GGTCAGCCCC
ACCGATTTGG AAGATTTCGC CGTGGGCTTC AGCGTCGGCA GCGGGATTGT CGAAGGCACC
GCAGAAATCT ACGACCTCAA GCTCTCGGGC AGCGGCTCGG CGATGTATGC CGACCTGGAA
ATTTCCAGCC GGGCATTCTG GAACCTGAAG AACCAGCGCC GCCAGCTGGC CGGCACCAGT
GGTTGTGGCC TGTGTGGGGT CGAAGCCCTG GAGCAGGCGC TGCCGGAACT GGCCGTGCTG
CCGGGTGCCC CCCTGCCGCC GGCCCAGTGG CTGGCCGGCC TGCGCGAGCG CATCGATGCC
TTCCAGCCTC TGGGCCAGCA CTGCGGCGCC GTACATGCGG CACTGTTCAT GGACCGCCAC
GGCGAATTGC TGCTCGGCCG TGAAGACATT GGTCGGCACA ACGCCCTCGA CAAGCTGATC
GGCGCCTTGC TGCGCCAAGG CATCGACAGC CAGGGCGGCC TGGCCATCGT CACCAGCCGC
TGCAGCCTGG AGCTGATCCA GAAGGTGCTG CGCGCCGGTA TCCAGACCCT GGTCAGCCTG
TCGGCGCCCA CTGGCCTTGC CCTGCAATGG GCACGCAAGC ACAACCTCAA CCTCATCCAT
TTGCCCAAGC ACAGCGCACC GCGGGTCTAC AGCCCAGCGG CGGAGTCGTA A
|
|---|
| Protein sequence | MNSKPPVCAA SSPLSMPAAS NRYDYVQLSD AKRDSTPLAE EVALAIVYNG LNQAVMLVSP
TDLEDFAVGF SVGSGIVEGT AEIYDLKLSG SGSAMYADLE ISSRAFWNLK NQRRQLAGTS
GCGLCGVEAL EQALPELAVL PGAPLPPAQW LAGLRERIDA FQPLGQHCGA VHAALFMDRH
GELLLGREDI GRHNALDKLI GALLRQGIDS QGGLAIVTSR CSLELIQKVL RAGIQTLVSL
SAPTGLALQW ARKHNLNLIH LPKHSAPRVY SPAAES
|
|---|
| |