Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2747 |
Symbol | |
ID | 6163044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3025302 |
End bp | 3026180 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641665524 |
Product | formate dehydrogenase family accessory protein FdhD |
Protein accession | YP_001791777 |
Protein GI | 171059428 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0059323 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGATGC CCATCGATGT GCCCCCGCCC GCCCTCGAAT CGTCCGTCAG ATTGCCGGTC ACGCGGCTGC GCGCCGGCCT GGTCGAGCGG GTCGAGGATC GGGTCGCCGA GGAGGTGCCG GTGGCGCTGG TCTACAACGG CATCTCGCAC GCGGTGATGC TGGCCAGTCC GCTCGATCTC GAGGACTTCG CGCTCGGTTT CTCGCTGTCG GAGGGCATCA TCGACAGCCC CGACGACCTG CTCGATTTCG AGCTGCAGCA CAGCGATCTG ACCGGCACCC GCAGCATGGT CGTCGACGGC CAGGCTCGCG AGGAGGTCGG CCTGACGCTC GACCTGCGCG TGACGCTGCG CTGTTTCATG CGCCTGAAGG AGCGCCGTCG CACGCTCGCC GGCCGCACCG GCTGCGGCCT GTGCGGCACC GAAAGCCTGG CCGAGGCGGT GCGCCCGGTG CGCCGTGAAG CAGCGGTGCT GGAGGTCAAG GCCGCCGCGC TGACGCGGGC CATGCAGGAG CTGGCCGCGC AGCAGGACCT GCAGCGCGGC ACCGGCGCCG CGCATGCGGC GGCCTGGTGC GCGCTCGATG GCGCGGTGCA GTTCGTGCGT GAAGACGTCG GCCGCCACAA CGCGCTCGAC AAGCTGATCG GCCGCATCGC CCGCGACGGG CTCGATGTCG GCGCCGGCTT CGTCGCCGTC ACCAGCCGGG CCAGCTACGA GATGGTCTAC AAGACGGCGA GTGCGGGCAT CGGCCTGCTG GCGGCGATCT CGGCGCCGAC CGGGCTGGCG GTGCGCACCG CGCAGGCGGC CGGGCTGGTG CTGGCCGGCT TCACGCGCGG CGACCACACC ACGCTGTACG CCCACGCCGA GCGGGTGCTC GGCCGCTGA
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Protein sequence | MQMPIDVPPP ALESSVRLPV TRLRAGLVER VEDRVAEEVP VALVYNGISH AVMLASPLDL EDFALGFSLS EGIIDSPDDL LDFELQHSDL TGTRSMVVDG QAREEVGLTL DLRVTLRCFM RLKERRRTLA GRTGCGLCGT ESLAEAVRPV RREAAVLEVK AAALTRAMQE LAAQQDLQRG TGAAHAAAWC ALDGAVQFVR EDVGRHNALD KLIGRIARDG LDVGAGFVAV TSRASYEMVY KTASAGIGLL AAISAPTGLA VRTAQAAGLV LAGFTRGDHT TLYAHAERVL GR
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