Gene Lcho_2747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2747 
Symbol 
ID6163044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3025302 
End bp3026180 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content72% 
IMG OID641665524 
Productformate dehydrogenase family accessory protein FdhD 
Protein accessionYP_001791777 
Protein GI171059428 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0059323 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGATGC CCATCGATGT GCCCCCGCCC GCCCTCGAAT CGTCCGTCAG ATTGCCGGTC 
ACGCGGCTGC GCGCCGGCCT GGTCGAGCGG GTCGAGGATC GGGTCGCCGA GGAGGTGCCG
GTGGCGCTGG TCTACAACGG CATCTCGCAC GCGGTGATGC TGGCCAGTCC GCTCGATCTC
GAGGACTTCG CGCTCGGTTT CTCGCTGTCG GAGGGCATCA TCGACAGCCC CGACGACCTG
CTCGATTTCG AGCTGCAGCA CAGCGATCTG ACCGGCACCC GCAGCATGGT CGTCGACGGC
CAGGCTCGCG AGGAGGTCGG CCTGACGCTC GACCTGCGCG TGACGCTGCG CTGTTTCATG
CGCCTGAAGG AGCGCCGTCG CACGCTCGCC GGCCGCACCG GCTGCGGCCT GTGCGGCACC
GAAAGCCTGG CCGAGGCGGT GCGCCCGGTG CGCCGTGAAG CAGCGGTGCT GGAGGTCAAG
GCCGCCGCGC TGACGCGGGC CATGCAGGAG CTGGCCGCGC AGCAGGACCT GCAGCGCGGC
ACCGGCGCCG CGCATGCGGC GGCCTGGTGC GCGCTCGATG GCGCGGTGCA GTTCGTGCGT
GAAGACGTCG GCCGCCACAA CGCGCTCGAC AAGCTGATCG GCCGCATCGC CCGCGACGGG
CTCGATGTCG GCGCCGGCTT CGTCGCCGTC ACCAGCCGGG CCAGCTACGA GATGGTCTAC
AAGACGGCGA GTGCGGGCAT CGGCCTGCTG GCGGCGATCT CGGCGCCGAC CGGGCTGGCG
GTGCGCACCG CGCAGGCGGC CGGGCTGGTG CTGGCCGGCT TCACGCGCGG CGACCACACC
ACGCTGTACG CCCACGCCGA GCGGGTGCTC GGCCGCTGA
 
Protein sequence
MQMPIDVPPP ALESSVRLPV TRLRAGLVER VEDRVAEEVP VALVYNGISH AVMLASPLDL 
EDFALGFSLS EGIIDSPDDL LDFELQHSDL TGTRSMVVDG QAREEVGLTL DLRVTLRCFM
RLKERRRTLA GRTGCGLCGT ESLAEAVRPV RREAAVLEVK AAALTRAMQE LAAQQDLQRG
TGAAHAAAWC ALDGAVQFVR EDVGRHNALD KLIGRIARDG LDVGAGFVAV TSRASYEMVY
KTASAGIGLL AAISAPTGLA VRTAQAAGLV LAGFTRGDHT TLYAHAERVL GR