Gene Rpic_4278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4278 
Symbol 
ID6285777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp574728 
End bp575543 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID642618761 
Productformate dehydrogenase family accessory protein FdhD 
Protein accessionYP_001892802 
Protein GI187926457 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTC TGCCCCACCA CCCCGCCGGC TTGCCCGTCG TTTCCACCGC CGCGACGAAA 
CGCACGCGCG CTGGCACGCA AGAGGACACC CCCGCCGCCA TTGCCGATGA AGCTGCGGTG
GCGCTTGTCT TCAACGGCAT CACGCATGCG GTGATGATGG CGTCGCCGAC TGACCTGGAA
GACTTCGCGC TGGGCTTTGC GCTGTCGGAA GGCATCATCG ACAGTCGCGC CGATTGGCGT
GGCGCAGACG TGGAAACGCA TCCGCATGGG CTCGAAGTAC ACGCAGAAAT TGCTTCGCAT
TGCTTCGTGC GGTTGAAGGA ACGCCGTCGG GCGCTGGCCG GCCCGACCGG CTGTGGGCTG
TGCGGCATTG AAAGCCTGCA GACTTTTGAA GACGCGCCGC AACCGCTTGT GCCACCCGCG
TGGTTGGCAT CACTTGCCGA CGCGCAGGTA TTGGATGCCA TGCAGGCGAT GACGGCGCAT
CAGCCGGCCA ACGCGCTCAC GGGCGGCTTG CATGCGGCGG GCTGGGTGCC CGCAGACACC
CATGCACCAC TGCATGTTCT GGAAGATGTG GGCCGCCACA ACGCTCTCGA CAAGCTGATC
GGCCGGCTGG CTCGGCTCGG CATCCGCCCC TCGGATGGGT TCATCGTCAT GACGAGTCGT
GCGAGCTTCG AGCTGGCGCG CAAGTGCGTT CAACTGCAGG TGCCGCTGCT GGCAACGATC
TCCGCGCCGT CCTCACTCGC GATCCGCCAC GCCAAGGCCG GCCAGCTGAC GCTGCTTGCG
TTCTGCCGAG GCGATAGCGT GACGCGGTTT GCGTAA
 
Protein sequence
MTFLPHHPAG LPVVSTAATK RTRAGTQEDT PAAIADEAAV ALVFNGITHA VMMASPTDLE 
DFALGFALSE GIIDSRADWR GADVETHPHG LEVHAEIASH CFVRLKERRR ALAGPTGCGL
CGIESLQTFE DAPQPLVPPA WLASLADAQV LDAMQAMTAH QPANALTGGL HAAGWVPADT
HAPLHVLEDV GRHNALDKLI GRLARLGIRP SDGFIVMTSR ASFELARKCV QLQVPLLATI
SAPSSLAIRH AKAGQLTLLA FCRGDSVTRF A